Lingula anatina: 106165037
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Entry
106165037 CDS
T04921
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
lak
Lingula anatina
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lak03016
]
106165037
Enzymes [BR:
lak01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
106165037
Transfer RNA biogenesis [BR:
lak03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
106165037
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-GeneID:
106165037
NCBI-ProteinID:
XP_013398568
UniProt:
A0A1S3IFX3
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MPTSTCENVVDDIEDLVGSFDLRPSQRHVTKKLILPKNKRKSNDEEIENTHIESIIPGMQ
SIYLKTWGCSHNNSDSEYMAGQLAAFGYNITDKKEEADLWILNSCTVKNPAEDHFRNEIK
KARDLQKHLVVAGCVPQGQPRADYLQGLSVIGVQQIDRVVEVVEETIKGHSVRLFGQKKQ
EGKKTGGADLSLPKIRKNPLIEIIAINTGCLNACTYCKTKHARGELGSYSIEDIVARAKQ
SFEEGVVEIWLTSEDLGAYGIDIGVTLPELLWRLVDTIPEGARMRLGMTNPPYILQHLEE
MAKILNHPRVYSFLHVPVQSASDSVLMDMRREYCVDDFKHVVNFLKERVPRVTIATDLIC
GFPTETEQDFEETMKLVEEFKFPSLFINQFFPRPGTPAARMPRIHPQEVKKRTKRVSELF
QSYRPYDHKLGEIQTVLVTEVSHDKQYYVGHNKCYDQVLVPKEEHLLGKLVEVKIKETGK
HYLIGELLKTQAVRPEGVPPPLRQGAVSGLQEEKVSSSGHWTSKWSTAAVVILVCAILIR
LAMKLMPTMR
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgccaacttcaacgtgcgaaaatgtggttgatgacatcgaagatctcgttggaagtttc
gacttaagaccatctcaaagacacgttacaaaaaaactcatactaccgaaaaacaaaaga
aaaagtaatgatgaagaaattgaaaatacacacatcgaaagcattataccaggtatgcag
agcatctacctcaagacatggggatgttctcataacaattctgacagtgagtacatggca
gggcaactggcagcttttggatacaatatcacagacaaaaaagaggaggcagatttgtgg
atattaaacagctgcactgtgaaaaaccctgctgaagaccattttagaaatgaaataaag
aaggcaagagatctccagaaacacttagtggtagccggctgtgtgccccagggacaaccc
agagcagactatctacaaggcctaagtgttattggtgtgcaacagatagatagagtggtg
gaggtagtggaagaaaccatcaaaggtcactcagtacgtttatttggtcaaaagaagcag
gagggaaaaaagactggaggtgctgatctgagcttacccaagataagaaagaacccatta
atagagattatagccattaacacagggtgtctgaatgcttgcacttactgcaaaacaaag
catgcaagaggagaactaggaagttattcaatagaagacattgtagccagggccaaacag
tcttttgaagagggggtagtagaaatctggctgacatctgaggacttgggtgcctatggt
atagacattggagtcaccttacctgaactgctgtggagacttgttgacacaataccagag
ggtgccaggatgagacttggcatgacaaacccaccatatatcttgcagcatctagaagaa
atggcaaagatcctgaaccatcccagggtatattccttcctgcatgttcctgttcagtca
gcctcagacagtgtactcatggatatgagaagagaatactgtgtagatgactttaaacat
gtggtcaattttctcaaagaaagagtacctagagtcacaattgcaacagatcttatatgt
ggttttccaactgaaacagaacaggactttgaagagactatgaagttagttgaagaattc
aagtttcccagtttattcatcaaccagtttttccccagaccaggcaccccagcagccagg
atgcctaggatacatccacaggaggtgaaaaagagaactaagagagtttcagaactgttt
cagtcatataggccatatgatcataagttgggtgagattcagactgtcctcgtgactgag
gtatcgcatgacaagcagtactatgttggacataacaagtgctatgatcaggttcttgtc
cctaaagaagaacatttactaggaaagttggtggaagtgaaaataaaagagactggaaag
cattacttaattggtgagctccttaagacccaggctgtaagaccagagggtgtgccccca
cctttgagacagggtgcagtctcgggcctacaagaagagaaggtgtccagctctggtcac
tggacgtccaaatggtccactgctgcagtagtgattctggtgtgtgcaatattgataaga
cttgctatgaaattaatgcccacaatgaggtag
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