Lingula anatina: 106165125
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Entry
106165125 CDS
T04921
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
lak
Lingula anatina
Pathway
lak03013
Nucleocytoplasmic transport
lak03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106165125
03015 mRNA surveillance pathway
106165125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lak03019
]
106165125
03041 Spliceosome [BR:
lak03041
]
106165125
Messenger RNA biogenesis [BR:
lak03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106165125
Spliceosome [BR:
lak03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
106165125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
106165125
NCBI-ProteinID:
XP_013398679
UniProt:
A0A1S3IMC2
LinkDB
All DBs
Position
Unknown
AA seq
963 aa
AA seq
DB search
MTDAGFFKGTSAEQDNRFADKKKKLMKTMRFSESIDKKVDMSKINLDTIKPWIAQRVTDL
LGVEDDVIVEFIYNQLEEKNPDGKEMQINLTGFLNAKNARTFISELWDLLLSAQDNISGI
PTVFLEQKKEEIKKRQAEQEHIRANLEKREKEIKEALAKERKDSEKRDQDKDKERDKRRR
RRRGDRSPSKSPRLRPSRSRTPTPEPKKDKEKQSGTEESDIEIKNKTVEDSQGKEDEDVK
PVNGNASVEEKENTEEKGKDKEMDKAPLETKRESKEKSNRSESRSPSPKKNKARSRSRDK
RSKSREKRSRSRDKRSRSRDKRSRSRDKRSRSRERRRSPRRRSPSPRRRSPSPRRRSPPR
RRPRRSPSPRRRSPRRRSISPRRRSISPRRRSRSPRRRPSPRRRRSSTGSPVRGPKTRKR
SDSSESPVRKAAASRSSSSASPPPVKKAPMEKKPRSSSSSSSSPSPPAKKKMVRDESDSS
PERKEKKADENYSDASPDKQKSVQKRRHYRTHEDLAKSDSSSDEEDAKPAAKSEKNRRDR
DKPSDGTRRRRSSPSPRDRWRRRSSPSPRRRPSPRRRYYSPDRWRSPPRRAVPRRSPPRR
RSPSPRRRSPERSPVRSRPRREPSKSASPPPRRRPSPSDSPRRRPAPAVSSPTKRHHSSS
TSPPPRRHRSSSASPPRKKASSPLTVTRMSSESPSPVRKRPAPSPKKRQPSHARSPLRKT
VKNLPARKRKSPSRSPPPPARRNRSPSASSSGSGSPPPKPKITKPRPESVSPSPPHKSRP
ERPRSVSASPPRQEKPKRTHSPLRSREAEEAGGDYRTVKRSGKVEPSSPPAKKRDLSPDV
EQSPKKKVLKEKAASASPSDASDNEAGTKKKKKKKDKKHKKHKKHKKHKHKKGKDGEGSG
SGEENSLEDLEKKLREKALKTLQQSKAKKDDPNNMDELERQLREKALKSMQQKAKSASDG
SSS
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgcaggctttttcaagggtaccagtgcagagcaggataatcgctttgcagac
aaaaagaaaaaactaatgaaaactatgaggttttctgagtctatagacaaaaaggtggat
atgtctaagataaacttggacacaataaagccttggatagcccaaagagtaacggatctt
ttaggagttgaagatgacgttattgttgaattcatttataatcagttagaggaaaagaat
ccagatggaaaagagatgcagataaacctcacaggatttctcaatgccaaaaatgctcgc
acatttatcagtgagttgtgggacctcttactaagtgctcaagacaacatcagtggaata
cctactgtgttcttagagcaaaagaaagaagaaataaaaaaacgacaggctgagcaagaa
cacattcgtgccaatctggagaagagggaaaaggagatcaaggaagcattggccaaggag
cgtaaagacagtgagaagagagaccaggacaaagacaaagaaagagacaaaagaagacgc
aggcgtcgtggagacagaagcccatccaagtccccaaggttacgtccatccagatcaaga
acaccaactccagaaccaaagaaagacaaggaaaagcagtctggaactgaggagtcagat
attgaaataaaaaataagacagtagaggacagtcaaggaaaggaagatgaagatgtgaag
cctgtgaatgggaatgcatcagtggaagaaaaagaaaacactgaagaaaagggaaaagat
aaagaaatggacaaagcacctttggaaacaaagagggaatcaaaagaaaaatcaaataga
tctgaaagcagatcaccctcacccaaaaagaacaaggcaagatccaggtcaagagataaa
agaagcaaatcaagggagaaaagaagtcggtcaagggacaaaagaagtcggtccagagac
aaaagaagtcggtccagagacaaaagaagtagatcaagggaaagaaggaggtcccctaga
agaaggtcaccatcaccaaggaggaggtcaccatcaccaaggagacgttctccaccccgt
agaagacctagaagaagtccatctccaaggagaagatcacctaggaggcgcagcatatct
ccaagaagacgtagcatatcacctaggagacgtagtcggtcaccaaggaggcgaccatca
ccgagaagacgacgctcatccacgggcagcccagttaggggaccaaagacaaggaaaagg
tccgattcatctgaaagtcctgtgagaaaagcggcagctagcagatcatcttcttcagcc
agtcctcctccagtaaagaaagcacctatggaaaagaaaccacgttcctcaagcagcagc
tctagctcaccatcacccccagctaagaaaaagatggtcagggatgaaagtgattcttca
ccagaacgtaaggaaaagaaagcagatgaaaattattcagatgcatctccagataaacag
aaatctgtgcagaaaagaagacattacaggacacatgaagatttggcaaagtctgacagt
tcatcagatgaagaggacgcaaaacctgctgcaaaaagtgaaaaaaatcgtagagacagg
gacaaacccagtgatggtacaagaagacgtaggagttccccatcccctcgtgatcgatgg
aggagaaggtcctctccttcaccaaggcgcagaccatcgcctaggagacgttactactca
ccagaccgttggcgttctcctcctcgcagagctgttccaaggcgctcacccccaagaagg
agatctccttcaccaagaagacgttcacctgagagatccccagtcagatcaagaccaaga
cgtgaacctagcaaatctgcttcaccaccacccaggagaagaccgtcaccatctgattct
cctagaaggagaccagctcccgctgtctcttcaccaactaaaaggcatcattcctcttct
acatcaccaccacctagaagacaccgctcctcttctgcaagcccaccaaggaaaaaagca
tcctctccacttacggttactcgtatgtcatcagagtcaccatcacctgtaaggaaaaga
cctgcaccttcaccaaagaagcgtcagccttcacatgcaagatcccctctgagaaaaact
gtgaaaaatttgcctgcaagaaagagaaagtcaccatctaggtcaccaccaccacctgcc
cgaagaaatcgttcaccatctgcttcatcatccggatcgggttcaccaccaccaaaacca
aaaattaccaaaccaagaccagagagtgtttccccatcaccaccacataaaagtagacca
gaaagacctcgctccgtctctgcttctccgccaagacaagaaaaaccaaaaaggacacac
agccctttaagaagtcgggaggctgaggaagctggtggagactatagaactgtaaagagg
tctggaaaggtggagccctcatctcccccagcaaagaaacgggatttgtcaccagatgta
gagcaatcgccaaagaaaaaagtcttgaaggagaaagctgcatcagcaagtccatctgat
gcctctgacaatgaagctggaactaaaaagaaaaagaagaaaaaggacaaaaaacacaag
aagcacaaaaagcataagaagcacaagcataagaagggaaaagatggagagggttcaggg
agtggagaggaaaatagcttagaggacctggagaaaaaattgagagagaaggctctgaag
acactccaacaatcaaaggctaagaaagatgaccctaacaacatggatgaacttgagagg
cagctgagagaaaaggcattaaaatccatgcagcagaaggcaaagtctgccagtgacgga
agcagtagctga
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