Lingula anatina: 106165838
Help
Entry
106165838 CDS
T04921
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
lak
Lingula anatina
Pathway
lak03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106165838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lak03019
]
106165838
Messenger RNA biogenesis [BR:
lak03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106165838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
106165838
NCBI-ProteinID:
XP_013399652
UniProt:
A0A1S3IN77
LinkDB
All DBs
Position
Unknown
AA seq
516 aa
AA seq
DB search
MAAAEVTKPPNEDDEAWLYGDADQKKATDTGAAGDDAPASSLSVEAEPFQPKKTDDKEAG
ELSGEEEAAKDEDDDDDSDDDVQVTIGDIKTGAAAYEAAPRNLFKATAYAKSGPASGVKA
PAKGVDVEAQGTINGVSTLEFDIDSLKNEEKPWRKPGADVTDYFNYGFNEDTWMQYCEKQ
RRMRLESGANKVFVHHGQGAQGAPPKPDTTPKTQGNILVLSSTSPARNYKAGPPPQRKVS
GTIDVIGGSAQSSRRVDSEPHPPGLPSDGLMNPDFKKPYPQPVPPPGVAPSMQPVPQHEY
PVPPPGMPPPGMPPPGMPPPPGVPPPGVPPPGYGPPPSFYPPPGAGPPPPDRGPPPGFED
RPPYGYEGPPPSFSPYSGGPPPHPGGPPPNWDPRPGGGYPSNQPPPWEYNRDRSPARSDS
YYDSSSDSEGERSSSRFNSSGGSGTRDRSRDSYERDSRYRRERRQPHRDREDRHRRRKHR
EEEEKDGDRHRGHKKKRSRRDREDGEGTEDSQQGVE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgctgaagtaacgaaaccgccgaatgaagacgatgaagcgtggctttatgga
gatgcagatcagaagaaagcaacagatacaggggcggctggtgatgatgctccagcgtcc
agtctgtcagtagaagctgaaccttttcagccaaagaaaacagatgacaaagaagcagga
gagctgagtggagaggaggaggctgccaaagatgaagacgatgacgatgactcagatgat
gatgtacaagttacgataggagatataaaaactggagcggccgcatacgaggcagcacct
aggaatttattcaaggcaacagcttatgcaaagtcagggccagcaagtggagtcaaggca
cctgctaaaggtgtagatgtggaagcccaggggacaattaatggggtatctacactagag
tttgatattgactctttaaagaatgaagaaaaaccatggaggaagccaggtgctgatgtg
acagactatttcaactatggtttcaatgaagacacatggatgcagtactgtgaaaagcag
aggaggatgaggttggagagcggggccaacaaagtctttgttcaccatggacaaggagcc
cagggagccccgcctaaaccagataccacacccaaaacacaggggaacattcttgtcctg
tcaagcacgtcaccagctcgtaactacaaagcaggcccgcctccacagcggaaagtctct
ggaacaatagatgtgattggtggctcagcacagtcttcacggcgagttgacagcgagccc
caccctcctggcttaccatcagatggtctaatgaacccagattttaaaaaaccatacccc
cagccagtgccgccccctggtgtggcacccagcatgcagcctgtcccacaacacgagtat
ccagtaccccctccaggaatgccacccccggggatgccgcccccagggatgcccccacca
cctggtgtgccacccccaggagttcctcccccaggatatggaccccctcccagtttttac
cccccaccaggagctggaccaccccctccagacaggggcccacccccagggttcgaagac
agacccccatatggttatgaaggtcctccgccctctttctcaccatattctggcggacct
ccccctcatcctggtggaccacccccaaattgggaccccaggccagggggtggatacccc
tccaaccagccacccccctgggagtacaatagagaccgaagtcctgcacgctctgattca
tactatgacagcagttcagacagtgagggagagaggagcagcagcaggtttaacagtagt
ggtggaagtggtaccagagacaggagcagggattcctatgaaagggattcaaggtatcgc
agagaaaggaggcaaccgcacagagatcgagaggatcgccatcgtcgaaggaaacacaga
gaagaagaagagaaagacggtgaccgtcaccgtggccataaaaagaaacgttcgcgaaga
gaccgcgaagatggcgagggaacggaggactcacaacaaggagtggagtga
DBGET
integrated database retrieval system
