Lingula anatina: 106166008
Help
Entry
106166008 CDS
T04921
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
lak
Lingula anatina
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lak04054
]
106166008
Enzymes [BR:
lak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106166008
Pattern recognition receptors [BR:
lak04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
106166008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
DEAD
DED
RIG-I_C
Helicase_C
RIG-I_C-RD
SWI2_SNF2
Flavi_DEAD
AAA_19
Motif
Other DBs
NCBI-GeneID:
106166008
NCBI-ProteinID:
XP_013399861
UniProt:
A0A1S3IPM6
LinkDB
All DBs
Position
Unknown
AA seq
1008 aa
AA seq
DB search
MAESKIRLKPYAKLRIRVCKELQTADFDFIKLALQDEIPAGELEEISNPQKLWNAMKKRN
LIEPNDVGFLKEIMEHIDRLDLVKVIEEYEEDRARNPELQAPDKDARYPEQVESPGEETA
KKEALPLHTASSDSQLQKSAKPSNRYHLLHSESSPGLSNANQPVIGSTGGQSPLLDVQGT
TGSQPGTRNIGASPLSPLNGNTSLTFSNHVESKETFPKQRVGFDGKVVNSSDGVGNFERP
QLPASLDSLSSQTARKPVYGDSEDLEEDSSCGASTAQAVFIGSEPVVEAAGEMTERNEGI
IRQASVPLEHLVQDGVPTKKKFSLRKYQRELANEAIEGTNTIICAPTGSGKTLTAAYISR
IRRSQVLKNGQKFKAVFIVCIRNLIQQQKDAFQTIFPPQDKIVGAISQTSDNLKTCLLNN
DIVMLTAQILVNDIKEGDVKITDFDLMIMDECHHTDLDHPYNMIMRLYMTEKKNREQRGE
STECLPQIIGLSASLGTGKGNNPLQHYYRVCANLDCFTISHVRNPVNEKELLCINPKPKT
DQIKLVQPRSSDNPFILMVKQMMEASEKEVSFPMELSKKFDKGSQGYENWVIENRNEAER
QALHTPEMRNTVITCRFLRDLNSALMLYDDLRGKDALEFLTKKILENDDRSIHSESPEVE
TKLKGRFMSQYRRLQSHCEAESPTSNKMLEELYRLLTEQFEKNPESRGIVLIRTREGCSA
LERCIQENVDQRLVRVGRMTGQSGDTSMTDVQQQKVIKAFKKGLAEPDGINLLVATDVAQ
EGLDIPKCNLMIRYNFVSNEIGSVQSKGRARAKESECYLIVPDGSINADREYKNMSKEHA
MLEALKDFDKLDPEEVRRNIKEKQNELWGRHLQAQAQSSARQSELEGSGVKVLCKECKAF
LCRGNFIIKKGGHYICVDLDFPKKIREEKIRRRDFRTDAQVGVSICRQTVTCGQSFGPVL
EYKQGSRRKGYTLSKDKIMLLYPGKEEPVQVKKWPSVCFNIVEESVSD
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatcaaaaatcagattaaaaccatatgcgaaattgcgtattcgtgtatgcaaa
gaactgcagacagcagactttgattttataaaattggcactgcaggatgaaatacctgcc
ggcgaattggaggagatttcaaaccctcagaagctttggaatgccatgaaaaaaaggaac
cttattgaacctaatgacgttggttttctcaaggaaattatggaacacatcgatcgactt
gatttggtaaaagtcattgaagaatatgaagaggatcgtgcgcggaaccctgaattgcaa
gcacctgacaaggacgcgagatatccagagcaagtggaaagccctggagaagagactgct
aaaaaagaggctctcccactacatacagcatcgtctgattctcagcttcagaaaagtgcc
aagccatcaaacagatatcatttgctccattcagagtcatctccaggcttatcaaatgcc
aatcaaccagtaataggtagcacaggtggacaatctcctcttttagatgtccaaggaaca
actggcagtcagccaggaactcgtaacattggtgcaagcccccttagccctttaaatggg
aacacaagccttactttctctaaccatgttgagagtaaagagacatttccaaaacagcga
gttggcttcgatggaaaagttgttaactcgtctgatggcgttggcaactttgaaagaccc
caacttccagcttctcttgatagtctgagttcacaaactgcacgcaagccagtgtatggt
gatagcgaagacttagaggaagattcttcatgtggtgcttctacagctcaagcagtgttc
attggtagtgaaccagtggtagaggcagcaggtgaaatgacagaaagaaatgaaggcata
atcagacaggcgtctgtccctctggagcatcttgtccaagatggtgtcccaacaaagaag
aaattttctttgcgtaaatatcagcgcgagttggccaacgaggccatagaaggtacaaat
accatcatctgcgccccaactggaagtggcaagaccctgactgcagcatatatctctcgc
atcagaagaagccaggtgctgaaaaatggccagaaattcaaagcagttttcatcgtttgt
attcgaaatctaatccagcagcaaaaagatgcctttcaaaccattttcccgccccaggat
aaaatagttggtgccataagtcagacttcggacaatttgaagacatgtttgttgaacaat
gacattgtgatgcttacagcacagattctcgtcaatgatatcaaagaaggagatgtgaaa
atcaccgatttcgacctaatgataatggacgagtgtcatcacacagatttggatcaccca
tacaacatgataatgaggttgtacatgacggagaaaaagaatcgagagcaaagaggggag
tctacagagtgccttcctcagattattgggctttcagcctcgctgggcactggaaagggg
aacaatcctctgcagcattattatcgggtctgcgccaatttagactgcttcaccatcagt
catgtgaggaacccagtgaatgaaaaagagctgctttgcattaaccccaaacccaaaaca
gatcagatcaaactggtacagcctcgttcgtctgataatcccttcatcttaatggtaaaa
caaatgatggaagcaagtgaaaaggaagtcagctttcccatggagttgtccaagaagttt
gataagggcagtcaggggtacgaaaattgggtcattgaaaatagaaatgaagccgagcgc
caagcgcttcatacacctgaaatgcgtaatacagtcataacttgtcgatttctgagagat
ctgaattctgctcttatgttgtacgatgacctgagaggaaaagatgccctggaattccta
acaaaaaagatactggaaaatgatgaccgcagtattcacagtgagtcacctgaggtagaa
acaaagttaaagggaaggtttatgagccagtatagaagactgcaatcccattgtgaggca
gagtctccaacatcaaataaaatgctggaagagttgtacaggctgctaactgaacagttt
gaaaaaaatccagaatctaggggaatcgttcttataagaaccagagaaggttgctctgcc
ttggagaggtgcattcaggaaaacgttgaccagagattggtgcgtgtggggaggatgacg
gggcagagcggagacaccagtatgaccgatgtccagcagcagaaagtgatcaaggccttc
aaaaaaggtctggctgaacctgatggaataaaccttcttgttgccacagatgtcgcgcag
gagggtttagacatcccaaaatgcaacttgatgattcggtacaactttgttagcaacgag
attggatcggttcagtcgaaaggccgtgcaagggccaaggagagcgagtgctatctcatt
gtgccagatggttcaatcaatgctgacagagagtataagaacatgtcaaaggagcatgcc
atgttggaggcactgaaagactttgacaaactggaccctgaggaagtgaggagaaatatt
aaggagaaacagaatgaactgtggggcagacatcttcaagcacaagcccaaagtagtgca
agacagtcagaactggaagggtcaggtgttaaagttctatgtaaagaatgcaaagctttt
ctgtgcagaggaaattttatcattaaaaagggaggtcactatatatgtgtagatctagac
tttccaaagaagattagagaggaaaaaataagaagaagagactttagaacagatgcacaa
gttggtgtgtcaatttgcagacagactgtcacctgtgggcagtcttttgggcctgtacta
gaatacaagcaaggctcacgtaggaaaggctacaccctctccaaggacaagattatgctg
ctctacccagggaaggaagagccagtacaagtgaagaaatggccttcggtttgtttcaat
atagttgaagaaagtgtcagtgattaa
DBGET
integrated database retrieval system
