KEGG   Lingula anatina: 106166576
Entry
106166576         CDS       T04921                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
lak  Lingula anatina
Brite
KEGG Orthology (KO) [BR:lak00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lak03041]
    106166576
Spliceosome [BR:lak03041]
 Complex B
  Other components
   Complex B specific factors
    106166576
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_TEP1_2nd WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd NBCH_WD40 LisH_TPL Beta-prop_NWD2_C Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_DCAF4 Ge1_WD40 Beta-prop_NUP159_NUP214 Beta-prop_SCAP Beta-prop_Nup120_160 Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_VPS8 Beta-prop_BBS7 Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_NOL10_N Mala_s_1-like PROPPIN VPS8_N Beta-prop_WDR11_2nd WD_LRWD1 TolB_like TFIIIC_delta RE_LlaMI WDR54 LisH_2
Other DBs
NCBI-GeneID: 106166576
NCBI-ProteinID: XP_013400657
UniProt: A0A1S3IR25
LinkDB
Position
Unknown
AA seq 513 aa
MAVEIESADVVRLLEQYLKENNLLRTLSVLQDETGISLNTVDSVDSFVSDINNGHWDTVL
QAIQSLKLPDQKLIDLYEQIVLELIELRELGAARSLLRQTDPMIMMKQTQADRYVHLENM
LARSYFDPREAYPEGQTKERRRAAIAAALSGEVNVVPPSRLLALLGQALKWQQHQGLLPP
GTTIDVFRGKAAVREQEDEKYPTQLSKTIKFGQKAHVECARFSPDGQYLITGSVDGFIEV
WNFTTGKVRKDLKYQAQDNFMMMDDAVLCMSYSRDSEMLATGGQDGKIKVWKIITGQCLR
RFEKAHNKGVTCVTFSKDNGQLLSASFDQTIRIHGLKSGKTLKEFRGHTSFVNDAVFTQE
GHSIISASSDGTVKIWNVKTTECSNTFKSFGGAAGSDITVHSIHLLPRNAEQFVVCNRSN
TVSIMNMQGQIVRSFTSGKREGGDFVCAVVSPRGEWIYCVGEDMVLYAFSTTTGKLERTL
TVHEKDVIGISHHPHQNLIGTYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atggcggtggaaatagagtctgcagatgttgtcaggttgcttgaacagtacctcaaagaa
aataacctactgaggaccttgtcagttttacaggatgagactgggatttctctaaataca
gtagattctgtagacagttttgtgtcagacatcaacaatggccattgggacacagtactt
caggccatccagtccctcaaactgccagaccagaaactgatagatctttatgaacagatt
gtattggaactgattgagttgcgtgaactgggagcagcgagatccttactccgccagaca
gaccctatgatcatgatgaagcagacccaggctgatagatatgttcacttagaaaacatg
ttggccaggtcttactttgacccaagagaggcttatcctgagggtcaaaccaaggaaagg
cggagggcagccatagcagctgcgttgtctggagaagtgaatgtcgtccctccctcacgt
cttcttgctcttcttggtcaggccttgaagtggcagcaacaccagggattacttcctcca
ggcaccactattgatgtgttccgtggtaaagcagcagttcgtgaacaagaagatgagaag
tatcctacccagctcagtaaaacaattaagtttggccagaaagcccacgtggagtgtgcg
aggttctctcctgatggccagtatcttatcactggatcagtggacggctttatagaggtg
tggaactttaccacgggcaaagtgaggaaggatctcaagtatcaggcccaggataacttc
atgatgatggacgatgctgtactgtgtatgagttatagtagagactcagagatgttggcc
acaggaggacaagatggaaaaattaaggtgtggaagataataactggacaatgtttgagg
cggtttgagaaggcccacaacaaaggagtaacctgtgtcaccttctccaaggacaatggt
cagctgttgagtgcatcctttgaccagaccataagaattcatggtttaaaatctggaaaa
acactgaaagagttccggggtcacacatcatttgtcaatgatgcagtgttcacccaggag
ggccacagtattatcagtgccagttcggatggcacagtaaaaatctggaatgtgaagacc
acagaatgcagcaacacatttaaatcatttggaggtgcggcggggagcgatattactgta
cacagcatccacttactgcctcggaatgctgagcagtttgtggtgtgcaacagatccaac
actgtgtccattatgaatatgcaaggacagattgtgcgtagttttaccagtggtaaacgt
gagggtggtgactttgtgtgtgctgtggtatctccgcggggagagtggatatactgtgtg
ggagaggacatggtgctctacgccttcagcacaactacagggaaactagagagaactttg
acagtccatgaaaaagatgtgataggcatatctcaccacccgcatcaaaacttaattggt
acttactcggaggatggccttttgaaactttggaaaccttga

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