Lingula anatina: 106167054
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Entry
106167054 CDS
T04921
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
lak
Lingula anatina
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lak03009
]
106167054
Enzymes [BR:
lak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106167054
Ribosome biogenesis [BR:
lak03009
]
Eukaryotic type
Pre-60S particles
Helicases
106167054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
106167054
NCBI-ProteinID:
XP_013401190
UniProt:
A0A1S3ISK5
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MEGVWDNLSVTLSKFITNVLKKLKFKRMTPVQAACIPLFMSNKDVAVEAVTGSGKTLAFL
IPILEILNRREDKLRKKDVGAIIITPTRELAVQISEVLTKFLELAPQFTQLLLIGGANPL
KDIQRFRDQGGHIIIATPGRLEDLFQRRQEGVDIAASVKALEVLVLDEADRLLDMGFEAS
INTILSYLPKQRRTGLFSATQTQEVEALIRAGLRNPVRVTVKEKNTGDTVGTQRTPSSLQ
NYYMVCDSDKKFNYLVDFLKSHSQLKNMVFFSTCASVDYFSKALETLLPNTEVLSIHGKM
KVKRNTIFTKFKNLKSGILMCTDVMARGIDIPDVNWVIQFDPPSSATAFVHRCGRTARIG
NTGNALVFLIPTEESYVQFLSINQKVPLKMLQPPHLKVDLLPKLKQMAREDRAIFEKGMR
AFVSFMQAYAKHECYLIFRIKELDIAKLAKGFGLLQLPKMPELKGKTFPDFIPDPVDLMT
IPYKDKSREKQRQEHLKIYHQTGVFPGKKVKIHKKETVPWSKQKNRKEKKKQRKEVKEQR
KRKMEFNDEELDELEKDAKLVKKLKRKKITEKEFNHKFDDLSDENGT
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggagggagtctgggataatctgagcgtaactttgagcaaatttatcactaatgtgctg
aaaaagttaaaattcaaacgtatgactccagttcaggcggcatgtattccactgtttatg
agtaataaggatgtagctgtggaggcagtgacaggatcagggaagactttagcatttctc
atccctatactggaaatactaaatagaagggaggacaaattaagaaagaaagatgttggt
gccattataattactcccacgcgagagttggcagtacagatcagtgaagtcttgacaaag
ttcctagagctagccccacagtttacacagcttctgcttattggtggtgcaaatccactt
aaagatattcagagatttagagatcaggggggacacattattattgccacaccaggtcgt
ttagaagatctgtttcagagaagacaggaaggtgtagatatagctgcaagtgtgaaagca
ttggaggtcttagtattagatgaggctgacagactattagatatgggttttgaggcaagt
atcaacacaattcttagttaccttcccaaacagaggagaacgggcctgttttctgccact
caaactcaggaagttgaagctttaataagggcaggtttaagaaacccagtcagagtgact
gtgaaggaaaaaaatactggagacactgttggaactcaacgaacaccatcttcattacag
aattattatatggtttgtgatagtgataagaaattcaactatctggtagactttctgaag
agccatagtcaactgaaaaacatggtgttctttagcacatgtgccagtgtagattatttc
tctaaagccttagagacgttgcttccaaacactgaagtattaagtatacatggaaaaatg
aaagtgaaaaggaatacaatatttacaaaattcaaaaatttgaaaagtggtattttgatg
tgcacagatgtaatggctagaggtatagacatccctgatgtgaactgggtaatacagttt
gatcctcccagctcagcaactgcctttgtacatcgttgtggaagaactgccaggattggg
aacactggaaatgctttggtctttctgattccaactgaggaaagctatgtgcagttctta
tctattaatcaaaaggtacctctgaagatgttgcagccaccccatttgaaagtagattta
ttaccaaagcttaaacaaatggctagagaagacagagctatatttgagaaaggaatgcgg
gcatttgtttcttttatgcaggcttatgccaaacacgagtgttatcttatatttaggata
aaagagcttgacatagcaaaattagcaaaaggatttggacttctccagttaccaaaaatg
cctgaactgaaggggaaaacatttcccgattttattccagatccagtagatttaatgaca
attccttacaaagataaaagcagagaaaagcaaagacaagaacatctgaaaatttaccat
caaacaggtgtattcccaggaaagaaagtcaaaattcataaaaaggaaacggtaccttgg
tccaaacaaaaaaatcgaaaagaaaagaagaaacaaaggaaagaagtgaaagagcaaaga
aaacgtaaaatggaatttaatgatgaagaattggatgaattagaaaaagatgcaaaactg
gtcaaaaaactgaaaagaaaaaagataactgaaaaggagttcaatcataaatttgatgac
ctatcagatgagaatggaacttga
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