Lingula anatina: 106167270
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Entry
106167270 CDS
T04921
Name
(RefSeq) exosome complex exonuclease RRP42
KO
K12589
exosome complex component RRP42
Organism
lak
Lingula anatina
Pathway
lak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106167270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lak03019
]
106167270
Messenger RNA biogenesis [BR:
lak03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106167270
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
106167270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
106167270
NCBI-ProteinID:
XP_013401455
UniProt:
A0A1S3ITB7
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MAEVLLSEAERTFIIHGVQDNVRADGRCSEDYRHMELETDVVSNSNGSARIRLANTDVLV
GIKAELSPPAPGRLDEGRLEFFVDCSANATPEFEGRGGEDLATEIGNMLSRAYDNPRCLD
LRSLCVIPGQQCWALYIDVLLLECGGNVFDVASFAVKAALHNAKLPVVTVSEEEGGEMNL
ELSDDPFDCKRLDISHTPCLVTVSKIGHNHVVDATLEEEACCLARLMLGITTEGTLTAMK
KEGSGSLDPDSVYEMMESGKKVGQAINVALLQKLTEEEKLGLTKRQKGFLR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggttttgttgagtgaggcagagcgtacttttattattcacggcgttcaggat
aatgtgcgtgcagatgggaggtgcagtgaagattacagacacatggaactggagactgat
gttgtgtcaaattctaatggatcagccagaataagactggccaatactgatgttcttgtt
ggcatcaaggcagagctcagccctccagcacctggcagactggatgagggacgactagaa
ttctttgtagattgctctgccaatgccacgccagagtttgagggcagagggggagaggac
ctggccactgagataggtaacatgctaagtagagcctatgacaaccctcgctgcctggac
ctaagaagtctgtgtgtgattcctggacaacagtgctgggctttgtatatagatgtcttg
ctgttagaatgtgggggtaacgtatttgatgtggcatcttttgctgtgaaggctgcttta
cataatgcaaaactcccagtggtgactgtcagtgaagaggaaggcggggagatgaatctc
gagttgtctgatgatccgtttgactgtaagaggttggatatttcacacacaccatgtttg
gtcacagtcagcaagattgggcacaaccatgtggtggatgcgacgctagaggaggaagct
tgctgcttggccaggttgatgttaggtataacaacagaaggaaccctaaccgccatgaag
aaggaaggctctggaagtctggaccctgacagtgtgtatgaaatgatggagtctggtaaa
aaagtcggacaggccatcaatgttgctcttttacaaaagcttacagaagaagaaaaactg
ggacttacaaaaagacaaaaggggtttctacgatag
DBGET
integrated database retrieval system
