Lingula anatina: 106168472
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Entry
106168472 CDS
T04921
Name
(RefSeq) DNA excision repair protein ERCC-8
KO
K10570
DNA excision repair protein ERCC-8
Organism
lak
Lingula anatina
Pathway
lak03420
Nucleotide excision repair
lak04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106168472
09124 Replication and repair
03420 Nucleotide excision repair
106168472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lak04121
]
106168472
03400 DNA repair and recombination proteins [BR:
lak03400
]
106168472
Ubiquitin system [BR:
lak04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
106168472
DNA repair and recombination proteins [BR:
lak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
106168472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EIPR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_WDR75_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_DCAF4
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
Beta-prop_Vps41
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
106168472
NCBI-ProteinID:
XP_013402995
UniProt:
A0A1S3IXS1
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MSSLVGYLAYREQGIYPPSFLSRAETVKRAFSLGLSKYKDLEEVHRGGVTSLDIDPAEGR
FLLSGSSSGEVVIHDLHNTTGSLKYTFKCVAHVKRPIGRGRQNVSTHAHSGSVETAQWYP
LDTGMFLTSGMDSKLKIWDANALVPADSYEFDSSVYCHDMSPIATKHTLVACGIKGRIKL
IDLRSGSASHTLQGHRKTVYTLKWSTREPYVLASGGADSRVLLWDIRSAKGSFMKLDQHN
GASQSGNSEQTSTAHSGAVNGLCFTSDGLFLVTFGTDERLRLWNTSNGKNTMVNYGKINN
ENEKSVQVAISNSCDPTLVYVPEFADVAVYDMFSGERYHTLRGHYHQVTSCAIHPNTHDL
YSGSLDRNILQWTADRDSVEEALYQHEHLGKDDGGEGKTVSRTSQVNADEWSSDEEELIN
VPLEQFL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccttggtgggttatttagcctacagagaacaaggaatctatcctccaagcttt
ctcagtagagcggagacggtgaagagggcttttagtttgggtctcagcaaatacaaagat
ctggaagaagttcatagaggaggcgtaacgtctcttgacattgatccggccgaaggtaga
ttccttttatctggaagttcaagtggagaggttgtcattcacgatcttcataatacaaca
ggatctctaaaatacacattcaaatgtgtggcacacgtaaaacgtcccataggaaggggc
aggcagaatgtgtccactcatgcacactcaggcagcgtggaaactgcacagtggtaccct
ttagacacaggcatgttcctgaccagtgggatggattcaaaactgaaaatatgggatgca
aatgcattagttccagcagacagttatgagtttgacagcagcgtctactgtcacgatatg
tcaccaatagcaaccaaacacactctggtggcctgtggaataaaagggcgcatcaagtta
attgacctcagatcaggctctgccagccacacattgcaggggcacaggaagactgtatat
actctgaaatggtcaacacgtgagccatatgtactggccagtggaggggcagacagcaga
gttttgctgtgggacatacggagtgctaaaggcagcttcatgaagctagatcaacataat
ggagcatcacaaagtggaaactctgaacaaacatctacagcacacagtggtgcagttaat
ggcttgtgtttcaccagcgatggtctcttccttgtaacctttggcactgatgaaaggtta
agactttggaacacttcaaatgggaaaaacactatggtcaactatggaaagatcaataac
gagaacgagaaatcagtccaagttgccatatcaaattcttgtgatcccactctggtctat
gtcccagagtttgccgatgtggcagtgtatgatatgttcagtggagagcgctatcatact
ttacgtgggcactatcaccaggtgacgtcctgtgccattcaccccaatacacatgatctg
tactcggggtccttagacaggaatatattacaatggacagcagatagggactctgtggaa
gaggctctttatcagcatgaacatctagggaaagatgatggaggtgaaggaaaaaccgtc
agtagaactagtcaagttaatgctgatgaatggagtagtgatgaggaggagttaattaat
gtgccgctagaacagtttttatag
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