Lingula anatina: 106169756
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Entry
106169756 CDS
T04921
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
lak
Lingula anatina
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lak03041
]
106169756
03016 Transfer RNA biogenesis [BR:
lak03016
]
106169756
Enzymes [BR:
lak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106169756
Spliceosome [BR:
lak03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106169756
Transfer RNA biogenesis [BR:
lak03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
106169756
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
106169756
NCBI-ProteinID:
XP_013404816
UniProt:
A0A1S3J3H1
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MTAFEEMAVMPEIAKAVEEMDWSLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFSLPI
IQIVYETLKDIKEGKGAKAGAGKAAVAGSTKWGMNVFDRGEAMAINPEGLLCQSRDQRGW
HGCRSNKGLHGKGKYYYEMKVTDEGLCRIGWATEKATLDLGTDNQSFGFGGTGKKSHGRQ
FDNYGESFGLHDVIGSCLDLDNFTIKWSKNGVDLGKAYDIPPNMKNANFYAAICLKNAEG
LLNFGETPFAYPPKDGYIAVDEAPRDCVVSSRAGGSTPATAQQAPNAPQAIIIEPSRELA
EQTLNQIQKFKKYLENPVIREVLCIGGIAARDTINSLMDGVDIVVGTPGRLEDLISTGKL
LLSSVRFFVLDEADGLLSAGNKDLIDRIHQQIPKITSDGKRLQMVVCSATLHSFDVKKLA
ERLMHFPVWIDLKGQDSVPETVHHVVCNVDPLKDVSWKMLKRHVQTDGVHEADRYMPQTP
DQETLSEAVKMLKGEYLIRAIQEHKMDRGLIFCRTKLDCDNMERYFITYGGGPHQRNSPF
SCVCLHGDRKPQERKANLEKFKNNEVRFLICTDVAARGIDIHGLPYVINVTLPDEKENYV
HRIGRVGRAERMGLAISLVSTVKEKVWYHSNCQNRGRGCYNTDLTIHGGCCIWYDEPKYL
ADIEEHLGVTIDQVEPDLKVPVNEFDGKVVYGQKRTVGGSGYKGHVEMLAPTVSELAALE
KKAQTSFINMKYKKTLVTTR
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgactgcattcgaagagatggctgttatgcctgagattgccaaggcagttgaggagatg
gattggagtcttcctacagatgtccaagccgaggctatcccactaattcttggcggagga
gacgtcctgatggctgctgagactggcagtggaaaaactggggcatttagtcttccaatc
atccaaattgtgtatgagacactgaaagatataaaagaagggaagggagcaaaggcaggg
gctggaaaagctgcagttgcaggaagtacaaaatggggtatgaacgtatttgacagagga
gaggccatggccattaatcctgaaggattactctgtcagagcagagatcagcgtgggtgg
catggctgccgtagcaacaagggactgcatggaaaaggaaaatattactatgaaatgaaa
gtcacagatgagggcctatgtaggataggctgggccacagagaaggccacactggatttg
ggcaccgacaaccagagttttgggtttggtggaactgggaagaaatctcatggaagacag
tttgataattatggagagtcatttggtttacatgatgtcattggcagttgtctggacttg
gataacttcaccatcaagtggtcaaagaatggtgttgatcttgggaaggcttacgacatt
cctccgaacatgaaaaatgcaaatttctatgctgccatatgcttaaagaatgctgagggc
ctgctgaattttggggagactccctttgcatatccacccaaagatggctatatagctgtt
gatgaagcacccagagactgtgtggtatcgtcgagagcagggggatctacccctgccaca
gctcagcaggcaccaaacgctccacaagctatcattattgagccttccagagagcttgca
gagcagactttaaaccaaattcaaaagtttaagaaatatcttgaaaacccagttatccga
gaggtgttgtgcattggtggtatagcagctagggacactattaatagtcttatggatggg
gtggacattgtggttgggacaccaggtcgcttggaagacctcatctccactgggaaatta
ctgctgtcttctgtcagattctttgttttagatgaagctgatggtttactctctgcggga
aacaaagatttgattgatagaattcatcagcaaatcccaaagattactagtgatggcaaa
cgattacagatggttgtctgttctgcaactctgcactcttttgatgtgaagaaactggct
gaacgtctaatgcatttcccggtgtggatagatttgaaaggacaagactctgtaccagag
acggtgcatcatgttgtgtgcaatgtggacccacttaaggatgtcagttggaagatgtta
aagcgccatgtccagactgacggagtacatgaggctgacagatatatgccgcaaactcca
gatcaagagaccctttctgaggccgtgaagatgctgaagggagagtatcttattcgtgcc
atccaggaacacaagatggaccgcggcctcatcttctgcagaactaagttggattgtgac
aatatggagcgctatttcatcacatatggaggcggtcctcatcaaagaaacagcccattt
tcttgtgtgtgcctacatggtgaccggaaaccacaagagagaaaggccaatttggaaaag
ttcaagaataatgaggtcagattcctcatatgcacagatgtggcggccagaggtattgac
atccacggacttccatatgtgataaatgtgacacttccagacgagaaagaaaattatgtt
caccgaattggcagggttggtagagctgaaagaatgggattggccatttccttagtttct
acagtaaaggaaaaggtgtggtaccattcaaactgtcaaaaccgtggccgtgggtgttac
aatactgacctcaccattcatggtggctgctgcatttggtatgatgaaccaaagtatctg
gccgacattgaggaacacttgggagtgaccattgaccaggtggagcctgacctcaaggta
cctgtcaacgaatttgatggaaaggtggtctatgggcaaaaaagaacagttggggggagt
ggttacaaaggtcatgtggaaatgctggcaccaacagtttctgaactagcagccctggag
aaaaaggcccagacctcctttattaacatgaagtacaaaaagaccctagtgacgaccaga
taa
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