Lingula anatina: 106169811
Help
Entry
106169811 CDS
T04921
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
lak
Lingula anatina
Pathway
lak03013
Nucleocytoplasmic transport
lak03015
mRNA surveillance pathway
lak03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106169811
09122 Translation
03013 Nucleocytoplasmic transport
106169811
03015 mRNA surveillance pathway
106169811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lak03019
]
106169811
03041 Spliceosome [BR:
lak03041
]
106169811
03009 Ribosome biogenesis [BR:
lak03009
]
106169811
03012 Translation factors [BR:
lak03012
]
106169811
Enzymes [BR:
lak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106169811
Messenger RNA biogenesis [BR:
lak03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106169811
mRNA cycle factors
Stress granule specific factors
106169811
Spliceosome [BR:
lak03041
]
Complex C
Other components
EJC/TREX
106169811
Ribosome biogenesis [BR:
lak03009
]
Eukaryotic type
90S particles
Helicases
106169811
Translation factors [BR:
lak03012
]
Eukaryotic type
Initiation factors
eIF-4
106169811
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
AAA_30
Motif
Other DBs
NCBI-GeneID:
106169811
NCBI-ProteinID:
XP_013404883
UniProt:
A0A1S3J3P5
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MAASSRRVLSDDLKNVEFETSEDVEVVPTFDSMGLREDLIRGIYAYGFEKPSAIQQRAIK
PVIKGRDIIGQAQSGTGKTATFSIGILQTLDTQVRETQALVLSPTRELAVQIQKVILALG
DYMSVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRSIKMLVLDEAD
EMLNKGFKEQIYDVYRYLPPATQVVLFSATLPHEILEMTSKFMTDPIRIIVKRDELTLEG
IKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGD
MPQKERDAIMKEFRSGASRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGR
FGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcggcatcatcccggcgtgttctttctgatgatttaaaaaatgtcgagtttgaaacg
agcgaagatgtcgaagtggtacctacgtttgattccatgggtctcagggaagatctcatc
agaggaatatatgcttacggttttgaaaaaccatctgcaattcagcagagagcaattaaa
cctgtcataaaaggaagagacatcataggccaggcccagtctggaacaggtaaaactgct
acattttccataggaattcttcaaacattggatacacaagtgagagaaacacaggctttg
gttctgtctccaaccagagaacttgctgtccagattcagaaggttattctggctttgggt
gattatatgagtgtacagtgtcatgcgtgtattggaggtacaaacattggtgaagatatc
cgcaagctagactatgggcagcatgttgtatctgggactcctgggagagtgtttgacatg
atcagaagaagaaatctccgaacacgctccatcaaaatgttggtattggatgaagctgat
gaaatgttgaacaaaggtttcaaggaacagatctatgatgtgtaccgctacctgccccct
gctacacaggtggtgttgttctcggccactctgcctcatgagatcttagagatgaccagc
aagtttatgactgaccccatccgcatcattgttaaacgtgatgagttgacattggaaggc
attaagcagttctttgtggcagtggagagagaagaatggaagtttgatacactctgtgat
ttgtatgacacactcactattacacaagcagttattttctgtaatactaagaggaaggtg
gactggttgactgagaaaatgagagaagctaactttacagtgtcctctatgcatggtgac
atgccccagaaggagagagatgccatcatgaaagagttcagatcaggagcaagtcgtgtg
ctgatcactactgatgtgtgggccagaggtattgatgtgcagcaagtgtccctggttatt
aactatgacctaccaaacaaccgtgagttgtacatccacaggattggtcgatcaggcaga
tttggtagaaagggtgtggccatcaactttgtcaaaaatgatgacattcgaatccttcgt
gatattgaacagtactattccacccagattgatgaaatgccgatgaatgtggctgatttg
atctaa
DBGET
integrated database retrieval system
