Lingula anatina: 106169835
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Entry
106169835 CDS
T04921
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
lak
Lingula anatina
Pathway
lak03030
DNA replication
lak03410
Base excision repair
lak03420
Nucleotide excision repair
lak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106169835
03410 Base excision repair
106169835
03420 Nucleotide excision repair
106169835
03430 Mismatch repair
106169835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lak03032
]
106169835
03400 DNA repair and recombination proteins [BR:
lak03400
]
106169835
DNA replication proteins [BR:
lak03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106169835
DNA repair and recombination proteins [BR:
lak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106169835
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
AAA_22
AAA_16
BRCT_2
Rad17
AAA_30
PTCB-BRCT
AAA_14
RuvB_N
nSTAND3
AAA_33
AAA_19
AAA_5
Motif
Other DBs
NCBI-GeneID:
106169835
NCBI-ProteinID:
XP_013404916
UniProt:
A0A1S3J3S5
LinkDB
All DBs
Position
Unknown
AA seq
1171 aa
AA seq
DB search
MIIIKESSGKKNKKGKDEEDEDSVMIVDDSDLSDREKEKEKKKEKKSGSKRKKISSNSEE
EEEIIVKKSKKSRESKAKKTHVIESESDEDIAVKPKHEGRGRKKHKKQPVTLDSDSDDES
RDRSPDVDPIKAAFQRQAQKAPTPKKSTPTKSTEEKKKQISVSDFFGGGSVKKSERKTAA
LKRKAPDGDTPSMDKEEHDDVDFQRTLELLDEQQAKKTKIESTKVTPSKSSQSRRHDSTP
SKSITVAETPVRESPRRSSRTTTPQKEESRSSSRTPRKEESRSSSKTPQKQTLTSDQTPQ
KSRSSSKGRSRSEVSVVEETPERSSPRTRSRSRSCTPAKSDTSSEPSVRQSPRRKENECK
TEGSSLAKKLAAKARSRELLNTKEEEEKELKKSTPQKKTPSKAKTPVKATPEKTESSPGT
PATLERKGSSYKSYLTRAGPSSLGAKEVPEGGDNCLEGLTFVITGVLESFERDDMKSAIE
KYGGKVTGSISKRTSYVVVGRDAGESKLSKARQLGTKQLDEDGVLDLIKTLPGKKSKYTV
AAEKMVREDSLSKSAVNEASGKKASLKKEASVTTPGKASHSESTPTKPGQSEAKIGVDKP
GESLLWVDKYKPTSMKQLIGQQGDKSNAKKLFHWLNNWHKNIASGKKPVFSRFDSDGAGY
RAALLSGPPGVGKTSAATVVCQEAGFSYIELNASDTRNKKSLEQEVAEALSNHTLVDFFG
SGQSSSSGQKHCLIMDEVDGMAGNEDRGGVQELVQLLKKTKIPIICMCNDRNHPKIRTLA
NYCFDLRFYKPRLEQIKGPMLSLCFKEKIKVPPPALNEIIAGANHDIRQIIHNLAMWSAS
DKSLTYEQAKSDANQAKKDMKIGPFDICRKVLVGGAETAGMTLADKQDLFFQDYDLTPLF
VHENYLSTTPQAAQGNMKKHLRLISQAVDSMCDGDMVSKVIRGQQRWSLLTSQSIFSSVI
PGDLMRGSLPQMVSFPSWLGKNSSKNKVDRILQELRTHMCLKVSANKEGLAMDYLPHLRS
SLTQPLVQGDADGVPDVIHMMDEYSLLREDFDNILEVTQWSGRKDPMASVPSKVKSAFTR
AYNKEAHMTPYAVSNMGKKGKKSVSSAEDYPGLGEEEDGEIGGGGGGEDEEEEEEVTADA
MIKVKKPPAAKGKGKGEGKGQGKGKGRGKKS
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgattatcatcaaagaaagtagtggcaagaagaacaagaaaggaaaagatgaggaagat
gaagacagtgttatgattgttgatgacagtgacttaagtgatagagagaaagaaaaagaa
aagaaaaaagaaaagaagtctggatccaaaaggaaaaagatatcaagtaacagtgaggag
gaggaggaaattatagtaaaaaagagcaagaaaagtcgggaatcgaaggcaaagaaaacc
catgtgattgaatcagaatctgatgaagatattgcagttaaacctaaacatgaaggcaga
ggacgtaaaaagcacaagaaacaacctgtgacacttgactcagattcagatgatgagagt
agagacaggagcccagatgttgatcccatcaaggccgcatttcaacgacaggcccagaaa
gctccgacaccaaagaaaagtactccaacaaaatcaacagaggagaagaaaaaacaaatc
agtgtttcagatttctttggagggggcagtgtcaagaaatctgagaggaaaacggctgcg
ttgaagagaaaagctcctgatggggacacccccagtatggacaaggaagagcacgatgac
gtagacttccaaaggacacttgaattactagatgaacaacaggctaagaagacaaaaata
gaaagcacaaaggtcacgccaagcaaatctagtcagtcaagaagacatgacagcacgcca
tctaaatcaataacagtggcagaaacacctgtcagagagtctcctcggagaagttccaga
actacaacaccccagaaagaagaatctaggtcaagttcaaggacacctcgcaaagaagaa
tccaggtcaagttcaaagacccctcagaaacaaacattgacatcagatcaaacaccgcag
aaaagtaggtcgtcttctaaagggaggtctcgcagtgaggtcagcgttgttgaagagaca
ccagagaggtcatcaccaaggacacgttcaaggtcaaggtcatgtactccagctaaatcg
gacacatctagtgagccaagtgttcgacagtcacctagaaggaaagaaaatgaatgtaaa
actgagggttcatccttggccaagaaactagctgccaaagctaggtcaagggaactcttg
aacaccaaagaagaagaagaaaaggaattaaagaaatcaacacctcagaagaaaacccca
tcaaaagccaaaaccccagtgaaagctactccagaaaaaactgagtccagtcccggtact
cctgccactctggagagaaagggcagcagttataaaagttacctgaccagggctggcccc
agcagtctgggggctaaggaagtacctgagggtggtgacaactgtctggaggggttgaca
tttgtcatcacaggtgtcctggagtcgtttgaacgggatgacatgaagagcgccatagag
aagtatggcggcaaggtgacggggagcatcagtaagaggacaagttatgtggtggtgggg
agagacgcaggggaaagcaagctgtctaaggcaaggcagttaggcaccaagcagctggat
gaagatggtgttctggatttaatcaaaactcttcctggaaagaagtccaaatacaccgtg
gccgcagagaagatggtcagagaggattctttaagcaaatcagcagttaatgaagcttca
gggaaaaaggcatctctcaaaaaagaagcctctgttaccacaccaggaaaagccagccat
tcagagtccacccctacaaaacctggccaatcggaagccaaaattggtgttgacaaacca
ggggaaagcttactttgggttgataagtacaaacctacaagtatgaagcagctgattggt
caacaaggagacaagagtaatgctaagaagttgtttcattggttgaataattggcacaag
aatattgccagtgggaaaaagccagtattcagtcgttttgactcagatggtgctgggtac
agagcagcgttgttatcagggccgccaggagtggggaagacctcagcagccactgttgta
tgccaggaggcaggtttctcatacatagaactgaatgcgtctgacaccaggaacaagaag
agtctggagcaggaggtggccgaggcacttagtaaccacactttggttgatttctttggc
agtggtcagagcagttccagtggtcagaagcactgcctgattatggacgaggtagacggg
atggccggcaatgaggacaggggaggagtacaggaactggttcagctgctgaagaagacc
aagattcctataatatgtatgtgcaatgacaggaatcaccccaagattaggaccctagcc
aattactgctttgacttaagattttataaaccaagattggaacagattaagggtcccatg
ctgtccctttgcttcaaggagaagataaaagtgccacctcctgcattgaatgagatcata
gctggcgcaaaccacgatatcagacagataattcacaatctggccatgtggagtgccagt
gacaagagcctaacatatgagcaagcaaaatctgatgccaaccaagccaagaaagacatg
aagattggtccatttgacatctgccgtaaggtgttggtgggaggagcggagactgctgga
atgactctggcagacaaacaggacctgttcttccaggattatgacctcacccctctgttt
gtccatgaaaactacctgtcaacaactccccaggctgcacaaggtaatatgaagaagcac
ctacgactgattagccaggctgttgacagcatgtgtgacggtgacatggtgtcaaaggtc
atcagaggtcaacagaggtggagcctgctcacaagtcagtccatcttctctagtgttatc
cctggtgatttaatgaggggttctctccctcagatggtctcatttccaagctggttgggt
aaaaactccagcaaaaataaagtggacagaattctacaggagttgaggactcacatgtgt
ctcaaggtttctgccaacaaggagggtctggccatggactatctcccccacctgcggtcc
tccctcacccagcccctggtacaaggagacgcggacggtgtccccgatgtcatccatatg
atggacgagtacagtctactgagagaagactttgataacattctggaggtgacgcagtgg
agtggacggaaggaccccatggcctctgtcccttccaaggtgaagtctgccttcacccga
gcctacaataaggaagcccacatgacgccctacgctgtgtctaacatggggaagaagggc
aagaagagtgtgagcagtgcggaggattaccccgggctgggggaggaggaagatggagag
atcggaggtggaggaggaggagaggatgaggaagaggaggaggaagtgactgctgatgca
atgattaaggttaaaaagccacctgcggctaaaggcaaaggaaagggagagggcaaaggt
caaggaaagggcaaaggtcgtggaaagaagtcataa
DBGET
integrated database retrieval system
