Lingula anatina: 106169904
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Entry
106169904 CDS
T04921
Name
(RefSeq) probable histone deacetylase 1-B isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
lak
Lingula anatina
Pathway
lak03082
ATP-dependent chromatin remodeling
lak03083
Polycomb repressive complex
lak04330
Notch signaling pathway
lak04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106169904
03083 Polycomb repressive complex
106169904
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106169904
04350 TGF-beta signaling pathway
106169904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lak03036
]
106169904
Enzymes [BR:
lak01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
106169904
Chromosome and associated proteins [BR:
lak03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
106169904
HDAC complexes
Sin3A-HDAC complex
106169904
BRAF-HDAC complex
106169904
REST complex
106169904
SHIP complex
106169904
MiDAC complex
106169904
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
106169904
Heterochromatin formation proteins
Other heterochromatin formation proteins
106169904
Chromatin remodeling factors
NuRD complex
106169904
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
106169904
NCBI-ProteinID:
XP_013405013
UniProt:
A0A1S3J412
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MATQPHSKKRVCYYYDGDIGNYYYGQGHPMKPHRMRMTHNLLLNYGLYRKMEIYRPHKAT
QEEMTKFHSDDYIKFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAG
AVKLNKQATDIAVNWGGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYCKI
FEPVMTKVMECYQPSAIVLQCGADSLSGDRLGCFNLTLKGHGKCVDFLKKYNLPLLLLGG
GGYTIRNVARCWTYETSIALGHDVANELPYNDYFEYYGPDFKLHISPSNMANQNTPEYLD
KICTRLFENLRMLPHVPGVQMTDIPEDALNDEEEDEDKENPDHRISIRASDKRITCEEEF
SDSEDEGEGGRRDRVSHKRKRPKMDEGEKKDEEKGEEKKDAVKTEPAENKEEKEASKEDK
PAEQETKEIPAVKKEEESSSKQDSTADSKEADQAPDERTEEKMDV
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggccactcagccgcacagcaagaagagagtttgctattattacgacggtgacattggc
aactactactatggacaagggcatcccatgaaacctcacagaatgcgaatgactcacaat
cttctgcttaactatgggctttacagaaagatggagatttatcgccctcacaaagccacc
caggaagaaatgaccaagttccacagtgatgactatattaaatttctgagaagtattcgt
ccagacaacatgtcagagtacaacaaacagatgcagagattcaatgtcggtgaagattgt
ccagtgtttgatggtctctatgagttttgccagctctcaacagggggctctgtagctgga
gcagtgaagctgaacaaacaagcgactgacatagcagtgaactggggaggaggtcttcat
cacgccaagaagtctgaggcttctggattctgttacgtcaatgacattgtacttgcaata
ctagaactactcaaatatcaccaaagagtattgtacgtggacattgacattcaccatgga
gatggtgttgaggaggcattctacaccacagacagagtgatgactgtctccttccacaag
tatggagaatactttccagggaccggagatctcagagacattggtgctggcaagggaaag
tactatgctgttaattttcctctgagagatggcattgatgatgagtcttactgcaagata
tttgagccggtgatgaccaaggtaatggaatgctaccagcccagtgcaattgtgctacag
tgtggtgctgattccctctctggagataggctgggatgtttcaacctcactctcaaaggt
catggtaaatgtgtggacttcctgaagaagtacaacctgcccctgctgctcctgggaggt
ggaggctatacaatcagaaatgttgccagatgctggacatatgaaacttccatcgcactt
ggacatgatgtggctaatgaacttccatacaatgactactttgagtattatggcccagac
ttcaagcttcacatcagtccatccaacatggcaaatcaaaatactcctgaatacttggac
aaaatttgcacaagactgtttgaaaatttgaggatgctgccccatgtcccaggagtccag
atgacagacatcccagaagatgctttaaatgatgaagaggaagatgaagacaaagaaaac
ccagaccacaggatatcaatccgtgctagcgacaagcgtatcacatgtgaagaagagttt
tctgacagtgaagatgagggagaaggaggtcgcagagacagagtcagtcacaaacgtaag
agacctaagatggatgaaggggagaagaaagacgaagaaaagggtgaagagaaaaaggat
gcagttaagactgagccagcagagaacaaagaagaaaaagaagcaagcaaggaggataaa
ccagcagaacaggagacaaaggaaatcccagcagtaaagaaagaagaagagtcgagctcc
aaacaggacagcacagctgacagtaaggaggcagaccaagcacctgatgaaagaacagag
gaaaagatggatgtctga
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