Lingula anatina: 106170078
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Entry
106170078 CDS
T04921
Name
(RefSeq) putative ATP-dependent RNA helicase Pl10 isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
lak
Lingula anatina
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lak03019
]
106170078
03041 Spliceosome [BR:
lak03041
]
106170078
03036 Chromosome and associated proteins [BR:
lak03036
]
106170078
Enzymes [BR:
lak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106170078
Messenger RNA biogenesis [BR:
lak03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106170078
mRNA cycle factors
Common to processing body (P body) and stress granule
106170078
Spliceosome [BR:
lak03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106170078
Chromosome and associated proteins [BR:
lak03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106170078
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
106170078
NCBI-ProteinID:
XP_013405265
UniProt:
A0A1S3J4F3
LinkDB
All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MPNDSNQNGQGLEQQFAGLDLNSANRGRGGGQYYRGGPPQQNGYGGFGRGGSKYVPPHLR
SGGGPAPPHVPPQGYGQPNFPPQGNFNQGGYGQFGNRGGFNNFGGPPVVQYPATFGVPQG
MDGGFRGGPQGGDFSSFNRRGGMGDRGGRGGRGGYNNRGGYNDGGQRWNRGPSEDRDGWG
GGGGSGRWQSGDNQRGGGGGGWGGNDRGRNDGWPTNNRWLAGNEDFQPRDGRRWNDEVDT
STDWSKPLPRNERMETELFEQAHRGINFDKYEDIPVEATGESAPENIEDFSDAHLGEIIS
NNIKLCNYTKPTPVQKYAIPIILAKRDLMACAQTGSGKTAAFLVPILNQIYEKGPGNMPM
PKGGGRSRKQYPLSLVLAPTRELASQIYDEARKFSYRSHVRPCVVYGGADVGGQMRDLDK
GCHLLVATPGRLVDMMERGKVGLDYCKFLVLDEADRMLDMGFEPQIRRIVEQDTMPPRGE
RQTMMFSATFPKEIQMLARDFLENYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLL
NAADVNTLGPESLTLVFVETKKGADALEDFLYREGYPATSIHGDRNQRDRELALHTFRSG
KCPILVATAVAARGLDIPNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFHEKNK
NIVRDLMDLLVEAHQEVPSWLESMSYESRMGGGPRRGGPKRFGGGFGSRDYRQQHQRGNK
HQAPNAMQQPAFNPMAYQMAYGGYGGSYGGSSYNTGAAPSTDWWGS
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgcctaatgattccaaccaaaatggccagggtctagagcagcagttcgctggtctagat
ttgaactccgcaaaccgcggacgcggaggtggacaatactacagaggtggaccacctcag
cagaatggatatggaggatttggtagaggcggctctaagtatgtgcctcctcacctgagg
agtggcggaggtccagccccaccacatgtccctccgcaaggatatggacagcccaatttt
cctccacaaggcaactttaaccaaggtggttacggccagtttggaaaccgcggcgggttt
aataactttggcggaccgcctgtcgtccagtatccggccacatttggggtgccacaagga
atggatggaggtttccgtggaggtccacaaggcggagacttcagcagctttaacagaaga
ggcggaatgggagatcgcggtggaagaggtggcagaggaggctataataacaggggagga
tacaatgatggcggccaacgctggaaccgtggaccgtcggaggatcgtgacggctggggt
ggtggcggcggcagtggacgctggcaatcaggtgacaaccaacgcggcggtggtggtggt
ggctggggcggtaacgaccgtggacgtaatgacggctggcccaccaacaaccgctggctg
gccgggaacgaagacttccagccgcgcgatggacgtcgctggaatgacgaggtggacacc
agcacagactggagtaaaccactgcccaggaatgagaggatggagaccgagctgtttgag
caggctcatcgtggcatcaactttgacaagtatgaagacatccctgtggaggccactgga
gagagtgctccagaaaacatagaggatttctctgatgcccatcttggtgaaatcatctcc
aacaacatcaagctgtgtaactacaccaagcccacgcccgtacagaagtacgccatcccc
attatcctggccaagcgtgatctcatggcgtgtgcacagacaggttctggcaagactgca
gccttcctggtgcccatcttgaaccagatctatgagaaaggaccaggaaacatgcccatg
cccaagggtggtggccgtagccgcaagcagtacccactgtccctggtgttggcacctaca
cgtgagctggcttctcaaatctacgacgaggcccgcaagttttcctaccgctctcatgta
cgcccatgtgtagtgtatggaggcgctgatgttggtggacagatgagagacttagacaag
ggctgtcatttgctggtggcgacacctggtagactggtggacatgatggagagaggaaaa
gttggcctggactactgcaagtttttggtccttgatgaggcagaccgtatgctggacatg
ggtttcgagccccagattcgccgcattgtggagcaggacactatgccaccgcgcggagag
cgccaaaccatgatgttcagcgccaccttccccaaggaaatccagatgttggctcgtgac
ttcttggagaactacatcttcttggctgtggggcgtgttggcagcaccagcgagaacatc
acccagaaggttgtctgggtggaagagaatgacaaacggtccttcttgctggacttgctg
aatgctgcagatgtcaacaccctcggcccagaatctctgaccttggtctttgtggaaacc
aagaagggagccgatgccctggaggacttcctgtacagggagggttacccagcaaccagt
atccatggcgatcgtaaccagagggaccgcgagcttgctcttcatacattccgctctggc
aagtgtcctatcctagtggcaactgctgttgctgcccgtggactggacatccccaatgtg
aaacacgtcatcaactttgatctgcccagtgacatcgaagagtacgtccaccgcattggg
cgtactgggagagtgggaaacctgggtcttgccacctccttcttccatgagaagaacaag
aacatcgtgcgtgacctgatggatctgctggtggaggcccaccaagaagtcccctcctgg
ctggagtccatgtcttatgagagccgcatgggaggaggaccacgcaggggaggacccaag
agattcggtggtggctttgggtcccgggattatcgccagcagcaccagcgcggcaacaag
caccaggcccccaacgccatgcagcagcccgccttcaaccccatggcctaccagatggcc
tatggaggctatggcggctcgtacggtggctcctcctacaacactggagcagcgccatct
actgactggtggggcagctga
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