Lingula anatina: 106170138
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Entry
106170138 CDS
T04921
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
lak
Lingula anatina
Pathway
lak04519
Cadherin signaling
lak04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
106170138
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
106170138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lak03000
]
106170138
Transcription factors [BR:
lak03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
106170138
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_5
Ank_4
Death
Ank_KRIT1
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
106170138
NCBI-ProteinID:
XP_013405334
UniProt:
A0A1S3J667
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MVDESEDSLDLTGHYSAEEDHDVRIAMAVGEAGPKQNGNNNLYPTTMNGVAAEVTPVING
FGSNTVGDEPYLEIVEEPQSRGFRFRYKCEGGSHGGLQGENSEKGKKTYPTVRINNWTGA
ARIVVSLVTDEEVPKTHAHELVGKNCQNGICLVELKGGSNNTATFPNMGVQHITRRNLVN
VLSERIQESIRLNHVLVTGNPNAGLTEAEKNQAKEQAEEQAKGMHLSTVRLCFQAYLMDE
NGTYSRMLPSVISKQIYDCKAPGAAALKICRLDRQAGSVRGNDEVFLLCDKVQKDDIAVR
FFEEDEDGRLKWEAYGNFGPPDVHRQYAIVFRTPPYWNVNIAKAVVVRMQLMRRSDRAIS
DPKPFTYFPEVADMDEISKKRKKTVGFPFSRYGGSGGSSGGYSSGGSGGGGSGLVGPAGG
TGAGGSATYNFAGTSQGVNRPVNPPMMKGSGYVQQPSLSTQPISNLNGNMSRANQHPIKM
QNIGGSMAAPSFPHYGPTDSEDLVTDSAPDFDDMNMFSPPYDSSSNQPYYGYPQKGLLAR
GTISVGKENNWKSDMENITSKTKQMGLDEVPIPTKGTSAPEPQPDSLSQQNNDLVMRLAA
RTAEALQDYAATGDTKALLAVQRHLVGVQDEAGDNCVHIAVIHKRVEACKNLLSVAVTIP
NSNIVNQLNKRRQTPLHLAVLTQQPLVVDLLLKSGADPYIVDLHGNTATHLAAELGSKGC
LEVLLKYMRLNTSPSNPFPELAMYNYEGFAPVHLAALCGSLQALKVILRVQTDVNIQDGK
SGRTALHHAVEKEDLALVGCLLLEAGADVNATTYDGNTALHLACGRECTGMVALLMAAGA
DPNIENSELLEEEKDDEGDGVDEEEKKKNDPEEDLIGHTAFDLAWRNAKIQKILNGEPYS
TFRDVEDHSAHLIKSGGKVYTLSQDSGLGSSSVTGDLDKLDYMSRVSLAKLLDPCKTDQD
WEAVAKYLDLGHLVSTFRPQKSPTLSLLDNYEVLDGTISQLTQCLKELGRTDAIAIIEEL
QELASEVKKTGIHSSVKQLIPPRRGQEPEKCDSGVESFFTPDDTRQEIVTH
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggtggacgaaagcgaggactccttggatcttactgggcactattccgctgaagaggac
cacgatgttcgcattgccatggcggtaggcgaggcaggtcccaagcagaatggtaataat
aacctgtatcccaccacaatgaatggagtggctgcggaagtcacaccagtaatcaatgga
ttcggttcaaatacagttggagatgagccatatttggaaatcgtagaggagcctcagtct
agaggatttcgtttccgttacaagtgcgagggcggatcacatggaggactgcaaggagag
aatagcgagaaaggaaagaaaacataccccactgtcagaatcaataactggactggcgcg
gcaaggattgtagtttccctggtaacagatgaagaggtgccaaaaactcacgcccacgag
ttggtcgggaagaactgccaaaacggtatttgcttggtggaattgaaaggtggttccaat
aacactgcaacctttccaaacatgggagttcagcatatcacccgtaggaacctggtgaat
gtcttgtctgaaagaattcaggagtccatcagactgaatcatgttcttgttacagggaat
ccaaatgctggcctaacagaggcagagaaaaatcaggccaaggaacaggcagaggaacaa
gccaagggtatgcacctcagcactgtgcgcctgtgtttccaggcttacctcatggacgaa
aatggcacatacagtcgcatgctgccgtccgtgatctcaaaacaaatttatgactgcaag
gccccgggggcggcagctctgaaaatttgccgtctagatcgccaggcaggcagtgtcaga
ggaaacgatgaagtgtttttactttgtgataaagtacaaaaagatgatatagcagtgcgt
ttctttgaggaagatgaagatgggagactgaaatgggaggcttatgggaacttcggaccg
ccagatgtacaccgccagtacgccatagtgttccgcacacctccttactggaacgttaac
attgctaaggctgttgtggttcgcatgcagttgatgcgaagatctgacagagctattagc
gatcccaaacctttcacgtactttccagaagtcgctgatatggatgagatctctaagaag
agaaagaaaactgttggattcccatttagtcgttatggtggctctggaggcagctcaggt
ggctacagcagcggaggcagtgggggaggaggatctggacttgtgggccctgctgggggt
actggggcaggagggagcgccacctacaattttgcaggcacatcacaaggagtgaaccgc
cctgtgaatcctccaatgatgaaaggatctgggtatgtacagcagccatcactcagcaca
cagccaatcagcaacctcaatggaaacatgtcaagggcaaatcaacacccaatcaaaatg
cagaatattgggggatctatggcagcaccctcctttccacattatggtcccactgacagt
gaagatttggtgacagactcagcaccagactttgatgacatgaacatgttcagtcctccc
tatgactcctcctcaaaccagccatactatggataccctcagaaaggactccttgcacga
ggcaccatctcagttgggaaggaaaacaactggaaatctgacatggaaaatattacttca
aagaccaagcagatgggactggatgaagtccccattccaacaaaaggaacctccgcccca
gagcctcagcctgattctctgtcacaacaaaacaatgacttggtgatgaggctggcagca
agaactgcagaggctctgcaggattacgctgcaactggagatacaaaagctcttcttgca
gtgcagagacacctggtgggagttcaggatgaagcaggggacaattgtgtccacattgct
gtcatccataaacgagtagaagcttgtaagaatcttcttagtgtggctgtcactattcca
aactccaacattgtcaaccaactcaacaagagaagacagaccccccttcacttggcagta
ctgacccagcagccactggtggtggacctcctgctgaagagtggggcagacccatacata
gttgatctccatggtaacactgccactcatcttgctgcagagctggggtccaagggctgc
ctggaggtgttgctgaagtacatgagactgaacaccagtcctagtaatcccttcccagag
cttgccatgtacaactatgaagggtttgcccctgtgcacctggctgccctgtgtggctct
ctccaggcattaaaagtcattctgcgtgtccagacagacgtcaatatccaggatggtaag
agtggacgtacggccctccaccatgccgtggagaaggaagacttggctctggtgggatgc
ttgctgctggaggctggggcagatgtcaatgccaccacatacgacggcaacactgccctc
catcttgcctgcggtcgtgagtgcacaggcatggtggctctactcatggccgccggggct
gacccgaatattgaaaactcagagttgttggaagaagagaaagatgatgagggagatgga
gttgatgaggaggagaaaaagaaaaatgacccagaggaggacctcataggacacactgcc
tttgatttagcttggaggaatgccaagattcaaaaaatactgaatggggaaccatattct
accttccgtgatgtggaggaccatagtgcacatctcatcaagtctgggggcaaagtatac
accctttcccaggactcagggctgggaagttcatctgtaacaggtgaccttgataaacta
gactacatgtccagagtctccctggccaagctgctggatccctgtaaaactgaccaagac
tgggaggcagtggccaaatatctggacctgggccatctggtcagcacattcaggccacag
aaaagtccaactctgtcccttctagataactacgaggtattggatggaaccatttcccag
cttactcaatgcctgaaggagctagggagaacagatgctattgccatcattgaagaactg
caagaactggcatcagaagtgaagaaaactgggatccacagcagtgtgaagcagcttata
ccaccaagaagaggacaagaaccagaaaaatgtgactctggagtcgaaagtttctttaca
cctgatgatacaaggcaggaaattgtcacacattga
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