KEGG   Lingula anatina: 106170217
Entry
106170217         CDS       T04921                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
lak  Lingula anatina
Pathway
lak03030  DNA replication
lak03410  Base excision repair
lak03420  Nucleotide excision repair
lak03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lak00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106170217
   03410 Base excision repair
    106170217
   03420 Nucleotide excision repair
    106170217
   03430 Mismatch repair
    106170217
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lak03032]
    106170217
   03036 Chromosome and associated proteins [BR:lak03036]
    106170217
   03400 DNA repair and recombination proteins [BR:lak03400]
    106170217
DNA replication proteins [BR:lak03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    106170217
  DNA Replication Termination Factors
   ELG1-RFC complex
    106170217
Chromosome and associated proteins [BR:lak03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    106170217
DNA repair and recombination proteins [BR:lak03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     106170217
  Check point factors
   HRAD17(Rad24)-RFC complex
    106170217
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_assoc_2 AAA_22 AAA_11 AAA_24 RuvB_N AAA_14 AAA_16 ResIII AAA_5 DEAD DNAX_ATPase_lid DUF815 AAA_7 AAA_30 Mg_chelatase AAA_19 PhoH bpMoxR nSTAND3 TIP49 AAA_2 AAA_28 ATPase_2 Glyco_hydro_57 RNA_helicase
Other DBs
NCBI-GeneID: 106170217
NCBI-ProteinID: XP_013405450
UniProt: A0A1S3J4Y9
LinkDB
Position
Unknown
AA seq 332 aa
MAGRDRISANLPWVEKYRPKQLDDLISHKDIISTINKFVVEDRLPHLLFYGPPGTGKTST
ILAVAKQLYSPKEFNSMVLELNASDDRGIGIVRGQILSFASTRTIFKKGFKLVILDEADA
MTRDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPEQMLPRLEHV
IQEEKVNVSEDGRKALVTLANGDMRKALNILQSTHMGHEEVTEDNVYTCVGHPLRQDIEN
IVNWMLNEDFTTAYNNILNLKTLKGLALQDILFEVHTYVHRIDFPIHVRIHLLEKMADVE
FRLTSGTNEKLQLSSLIAAFQVARDLVVDEAK
NT seq 999 nt   +upstreamnt  +downstreamnt
atggctgggagagaccgaataagtgcgaatcttccatgggttgaaaaatacagaccaaag
cagctagatgatctgatttcacataaggatataatttctaccattaacaagtttgttgtg
gaagacagactgccacatctgttgttctatggtccacctgggactgggaaaacaagtact
attcttgcagtggcaaagcagttatactctccaaaagaatttaactccatggttttggag
ctcaatgcatcagatgacagaggaattggtatagtgagagggcagatcctgagttttgca
agtacaagaacgatttttaaaaaagggtttaagttggtcatcctggatgaagcagatgct
atgacacgtgatgctcagaatgcactcaggagagttattgaaaagtttacagaaaacaca
aggttttgtttgatctgcaattatctgtcaaagatcattcctgcactgcagtcccgctgc
accaggtttagatttggtcctctcactcctgaacagatgctgccaagattggaacatgtc
atacaggaggagaaagtaaatgtttctgaagatggtcgcaaagctttagtaacattagca
aatggtgacatgaggaaggctttgaatattctgcagagtactcacatgggccatgaagaa
gtgacagaagacaatgtatatacatgtgttggacatcctctaaggcaagacattgaaaat
attgtcaattggatgctgaatgaagactttactacagcttacaataatattttaaatttg
aagaccttgaaagggctagctttacaagatattttatttgaagttcatacctatgtacac
agaattgactttcctattcatgtgagaatacaccttttggagaaaatggctgatgtggag
tttcgccttacatctggtaccaatgaaaagttacagctgagttctcttattgctgcattt
caagttgctagggacttagtagtggatgaagcaaaataa

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