Lingula anatina: 106170598
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Entry
106170598 CDS
T04921
Name
(RefSeq) pre-mRNA-processing-splicing factor 8 isoform X1
KO
K12856
pre-mRNA-processing factor 8
Organism
lak
Lingula anatina
Pathway
lak03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106170598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lak03041
]
106170598
Spliceosome [BR:
lak03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
106170598
Complex C
U5 SnRNP specific factors
106170598
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
106170598
NCBI-ProteinID:
XP_013405996
UniProt:
A0A1S3J6W7
LinkDB
All DBs
Position
Unknown
AA seq
2347 aa
AA seq
DB search
MALPYVVGPGGQLFMVGQAPIIQQPIIHHQPPKVPDYMNEDKLQEKARKWQQLQTKRYSE
KRKFGFIDAQKEDMPPEHVRKIIRDHGDMSSRKYRHDKRVYLGALKYMPHAVLKLMENMP
MPWEQIRDVKVLYHITGAITFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFP
PFDDEEPPLDYADNILDVEPLEAIQMELDPDEDKAVIDWFYDHQPLTDTRHVNGTTYKKW
NLTLPIMSCLYRLANQLLTDLVDSNYFYLFDLKSFFTAKALNLAIPGGPKFEPLVKDSTL
NDEDWNEFNDINKIIIRQPVRTEYRIAFPYLYNNIPFQVHLSWYHTPNVVFIKTEDPDLP
AFYFDPLINPISHRHAVKGTENLPDDDEEFELPEEVEPFLKGTPLYDDSTANGIALLWAP
RPFNLRSGRSRRALDVPLVKSWYREHCPSGMPVKVRVSYQKLLKYFVLNALHHRPPKAQK
KRYLFRSFKATKFFQTTTLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVK
TLTTKERKKSRFGNAFHLCREILRLTKLVIDSHVQYRLGNVDAFQLADGMQYMFAHVGQL
TGMYRYKYKLMRQIRMTKDLKHVIYFRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLL
ERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHYDLELRAAVMHDILDMMPEGIKQNKART
ILQHLSEAWRCWKANIPWKVPGLPIPIENMILRYVKAKADWWTNTAHYNRERIRRGATVD
KTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFP
PLSYKHDTKLLILALERLREAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQ
RAFKEAGIEFMDLYSHLIPVYDIEPLEKITDAYLDQYLWYEADKRRLFPPWVKPADSEPP
PLLVYKWCQGINNLQDVWDTAEGECNVMLESRYEKLYEKIDLTLLNRLLRLIVDHNIADY
MTAKNNVVINYKDMNHTNSYGIIRGLQFSSFIVQFYGLVLDLLVLGLQRASEVAGPPQMP
NDFLTFQDVATESAHPIRLYSRYIDRVHIFLRFSAEEARDLIQRYLTEHPDPNNENIVGY
NNKKCWPRDSRMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWEGSFVSVYSKDNPNLLFN
MSGFECRILPKCRMTHEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMNRFHNRVRQIL
MASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMP
SRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHDEDQLIPNL
YRYVMPWESEFIDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIPRINTLFQKDRH
TLAYDKGWRVRTEFKAYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHT
LFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVY
VGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELDALEIET
VQKETIHPRKSYKMNSSCADILLFAAYKWNVSKPSLLADSKDVMDNTTTQKYWLDIQLRW
GDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVMIALDLAYNLHSAFGNWFPGCKPLIQQ
AMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRV
TIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAAL
IRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILK
ATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNTDRTKVILKPDKTTITEQHHIW
PTLTDEEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAE
IEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETATFSSKTEWRVRAISATNLHLRTN
HIYVSSDDIKETGYTYILPKNILKKFIIISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMP
PQWGTHQTVHLPISLPNQEYLKEMEPLGWIHTQPNELPQLSPQDITTHAKVMSDNPAWDG
EKTVIITCSFTPGSCSLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYEKVQMLLSDRFL
GFFMVPSVGSWNYNFMGVRHDPNKKYELQLANPKEFYHEVHRPSHFLNFSSIEEGEFMNS
DREDMFA
NT seq
7044 nt
NT seq
+upstream
nt +downstream
nt
atggcattgccgtatgtggtaggtcctggtgggcagctgttcatggtgggacaggcccct
atcatacagcagccaatcattcaccaccagcctcccaaagtgcctgattatatgaatgaa
gataaactgcaagaaaaagccagaaaatggcaacagctgcaaaccaaaaggtacagtgag
aagcgtaaatttgggtttattgatgctcagaaagaagacatgccaccagagcatgtccgt
aagattatacgagatcatggagacatgtccagcaggaaatacagacatgataaaagagtc
tatctcggagctttgaagtacatgccccatgcagtgctgaagctaatggagaacatgccc
atgccatgggaacagatcagagatgtgaaggtgctctaccacatcactggagccatcaca
tttgtcaatgaaattccatgggtcatagagcctgtctacatagctcagtggggaaccatg
tggatcatgatgcgtagagaaaagcgtgatcgtcgccacttcaaaagaatgcgattccct
ccatttgatgatgaggagcctcccctggactacgctgacaacattctggatgtggagcct
ctggaggctatccagatggagctggatcctgatgaggacaaggctgtcattgactggttt
tatgatcaccaacctcttacagacacaaggcatgtgaatggcaccacgtataagaagtgg
aacctgactctgcctataatgtcttgtctgtatcgcctggccaaccaactcttgactgat
ctggtggatagtaactacttctacctgtttgacctcaagtcatttttcacagccaaggct
ctcaacttggctattccaggagggccaaagtttgagccccttgtcaaggacagcactctc
aatgatgaagattggaatgagtttaatgacataaacaagatcataattcgtcaacctgtg
aggacagagtacaggattgccttcccgtacctttacaacaacatcccattccaggtgcac
ttatcatggtaccacacacccaatgttgtgtttatcaagacagaggaccctgacttacca
gctttttactttgaccctctgatcaatcccatatcccacaggcatgctgtcaagggtaca
gaaaatctccctgatgatgatgaagagtttgagttaccagaggaagtggagcccttcctg
aagggtacccctctgtatgatgacagcacagccaatggtattgctttgttgtgggcacca
agaccatttaatttgaggtcagggaggtcaagacgagcactggatgtaccccttgtgaag
tcatggtatcgtgaacactgcccctcgggcatgccagtcaaagtaagggtgtcctaccag
aagttgctgaagtactttgttctcaatgcactacatcacagacctccaaaggcacaaaag
aaaaggtatctgttcagatccttcaaggctacaaagtttttccaaaccacaactctcgac
tgggttgaagtgggtttacaagtatgcaggcaaggctacaacatgttgaacctgttgatc
catcgcaagaatctcaactaccttcacttggattacaacttcaacctgaaacctgtcaag
actttgactactaaggaacgtaaaaaatctaggtttggcaatgctttccacttgtgtcgt
gagattctgcgtctgaccaagctggtcattgatagccatgtacagtacagactgggaaat
gttgatgccttccagttggcagatggcatgcagtacatgtttgcacacgtgggacagctg
acaggaatgtaccgctacaagtacaaactgatgagacagatcaggatgaccaaggacttg
aaacatgtcatctatttcagattcaacactggtcctgttggaaaaggtccaggctgtggg
ttttgggctccaggctggagagtgtggctgttcttcatgcgtggtatcacccctctcttg
gagcgttggctagggaacttgctgtccaggcagtttgaggggcgtcactccaagggtgtg
gccaaaactgtgaccaagcagagagttgagagtcactatgatctggagttgagagcagcg
gtgatgcatgatattcttgacatgatgccagaaggtatcaaacaaaacaaagccaggacc
atccttcagcatttgagtgaggcatggaggtgctggaaagccaacatcccctggaaggta
ccagggctaccaattccaattgagaacatgatcctgaggtatgtgaaggccaaggcagac
tggtggaccaatacagctcattacaacagagagagaatcaggagaggagccactgttgat
aaaactgtctgcaagaagaacctgggccgtcttacacgtctgtacctgaaggcagagcag
gaaagacagcacaactacctgaaggatggtccatacatcacagcagaagaggccgttgct
atctacaccaccactgtccactggctggagagcaggaggttctctcccattcctttccct
cctctctcatataaacatgacaccaagctgctcatcctggctctggaaagactgagagag
gcatacagtgtcaagagccggcttaatcagtctcagcgtgaagaacttggcctgatagaa
caggcatatgacaacccccacgaagccttgtcacgtatcaagcgtcacttgctgacacag
agagctttcaaggaggcgggtatagagttcatggacctgtacagccacctgatcccagtg
tatgatattgagcccctggagaagatcacagatgcctacctagaccagtacctgtggtat
gaggcagacaagaggaggttgttcccaccctgggtcaaacctgcagactctgaacctcca
ccactcctggtgtacaaatggtgtcaagggataaacaatcttcaggatgtatgggacact
gcagaaggggagtgtaatgtcatgttagagtcccgctatgaaaaactctatgaaaagatt
gatttaacactgttgaacagactgttacgtcttattgtggatcacaacattgctgattac
atgacagcaaagaacaatgtggttatcaactataaggacatgaaccacaccaactcctat
ggtattatcagaggtctgcagttctcatccttcattgtccagttttatggccttgtgctt
gacctgctggtgctgggtctgcagagagccagtgaagtggctgggccaccacagatgccc
aatgatttcctcacattccaggatgtagcaacagagagtgcccaccccatcagactgtat
tcaagatatattgacagagttcacatattccttaggttctctgcagaagaagctcgtgac
ttgatccagaggtaccttacagagcaccctgatcctaacaatgagaacatagtgggatat
aacaacaagaaatgctggccaagagactccaggatgaggcttatgaaacatgatgtcaac
cttggtcgagcagtgttctgggacatcaagaaccgtctgccccgctcagtgaccactgtc
cagtgggagggcagttttgtgtctgtgtacagcaaggacaaccccaaccttctgttcaac
atgagtggctttgagtgccgtatactgcccaagtgcaggatgacccatgaggagttcact
cacaaagatggggtctggaatctgcaaaatgaggtaaccaaggagaggacagcccagtgt
ttccttagagttgatgatgagtccatgaacagattccacaacagagtgaggcagatcctt
atggcatctggttctacaacctttaccaagattgtcaacaagtggaacactgccctcatt
ggtttgatgacctacttcagggaggctgtggtgaacacacaagagttactagacctgctg
gtcaaatgtgaaaacaaaatacaaacacgtatcaaaattggactgaactctaaaatgcct
agtcgtttccccccagtggtgttctacacccccaaagagctgggcggcctggggatgttg
tccatgggccatgtgttgattccacagtctgatctgaggtggtccaagcagactgatgtg
ggaatcactcacttcaggtctggaatgagccatgatgaggatcagttgatccctaacttg
tacaggtatgtgatgccgtgggagagtgaattcatagactctcagagagtgtgggctgag
tatgctctgaaacgacaggaggccaacgcacaaaacaggcgcctcactctggaagacctg
gaggacagctgggaccgtggtattcctcgtatcaataccttgttccagaaggacagacac
acacttgcctatgataaagggtggagggttaggactgagttcaaggcatatcaggtactg
aagcagaatccattctggtggacccaccagcgccatgacggcaaactgtggaacctgaac
aactacagaactgacatgatccaagccctgggaggagtagaaggcattctggaacacaca
ctgttcaagggcacctacttccccacatgggaaggtctgttctgggagaaggctagtggg
tttgaggagtccatgaagtacaagaagttgaccaatgcacagaggtcaggtctcaaccag
atccccaaccgtcgcttcactctttggtggtcacccactattaacagggcaaatgtgtat
gtaggtttccaggtacaactggacctgactggtatattcatgcatggcaagatccccact
ctgaagatctctctcatccagatcttcagggctcacttgtggcaaaagatccatgagagt
gtggtcatggacttgtgtcaggtatttgatcaagagttagatgccctggagattgagact
gtacagaaagagaccatccatcccagaaaatcttacaagatgaacagctcctgtgcagat
atcctgttgtttgctgcttacaagtggaatgtttccaagccttcccttcttgcagactca
aaagatgtgatggacaacaccacaacccagaagtactggcttgacatccagctacgttgg
ggagactatgactctcacgacatagagagatatgccagagccaagttcttggactatacc
actgacaacatgagtatctatccgtcccccactggggtcatgattgctctggatctggct
tataatttacacagtgcatttggcaattggttccctggttgtaagcctctgatccagcag
gccatggcaaagatcatgaaggccaaccctgccttgtatgtgctgcgtgaacgtatccgt
aaagccctccagctgtactcctctgagcccactgagccctacctgtcatcacagaactat
ggagagctgttctccaatcagatcatctggtttgtagatgataccaatgtctacagagtg
accattcacaagacatttgaaggtaacctgaccaccaagcccatcaatggcgccatcttt
atcttcaaccccaggacaggccaactgtttctgaagatcattcacacttctgtctgggca
ggacagaaacgtctgggccagctagctaagtggaagactgctgaggaagtggcagccttg
atccgttctctgcctgtggaggaacagcccaaacagatcattgtgaccaggaaaggaatg
ttggatcccctggaggtccacttgctggatttccctaacattgtgatcaagggaagtgag
ctgcagctgccattccaggcctgtttgaaggtggagaagtttggtgatctcattctgaaa
gccacagaacctcagatggtgttgttcaatttatacgatgattggctgaagaccatttca
tcttacactgcattttcccgtctgatcctgatactgcgcgcactgcatgtgaacacagac
cgaaccaaagtgatcctgaagcctgacaagaccaccatcacggagcagcaccacatctgg
ccaacactcacagatgaggagtggatcaaggtggaggtgcagctcaaggacctcatcctg
gctgactatggaaagaagaacaatgtgaatgtggcatccctcacccagtctgaaatccgt
gacataattcttggtatggagatatcagctccctcagcacagcgccaacagattgcagag
atagagaaacagaccaaggaacagtctcagctcacagcaaccaccacccgcacagtcaac
aagcatggtgatgagatcattacatctaccaccagtaattatgagactgcaacattctcg
tcaaagacagagtggcgtgttcgtgcaatttcagccactaatcttcacctgcgaactaac
cacatctatgtgtcatcagatgatatcaaggaaacggggtacacctatatcttacccaag
aatatcctgaagaagttcatcatcatttctgaccttagagcacagattgctggttacctg
tatggagtgagcccacctgacaacccccaggtgaaggagatccgctgtattgtaatgcct
ccacagtggggcacacatcagactgtgcacctgcctatttcactacctaaccaggaatat
cttaaggaaatggagcccttgggttggatccacactcagcctaatgaacttccccagctg
tccccacaggacatcacaacccatgccaaggtgatgtctgataaccctgcctgggatgga
gagaagacggtcataattacttgcagttttacccctgggtcctgctccttgactgcctac
aagttgacccccagtggctatgagtggggcagacagaacacagacaaaggaaacaacccc
aagggatatctaccatcacattatgagaaagtgcagatgttgctgtctgatagattctta
ggcttttttatggtgcctagtgttggatcttggaattataatttcatgggtgtccgtcat
gaccccaacaagaagtatgagttacagttggctaaccccaaagagttttaccacgaagtg
cacaggccatcccattttctgaacttcagcagcatagaggaaggagagttcatgaactct
gacagagaggatatgtttgcttag
DBGET
integrated database retrieval system
