Lingula anatina: 106170720
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Entry
106170720 CDS
T04921
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
lak
Lingula anatina
Pathway
lak03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106170720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lak03021
]
106170720
03036 Chromosome and associated proteins [BR:
lak03036
]
106170720
Transcription machinery [BR:
lak03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106170720
Coactivators
SAGA/TFTC/STAGA complex
106170720
Chromosome and associated proteins [BR:
lak03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
106170720
STAGA complex
106170720
TFTC complex
106170720
SAGA complex
106170720
SLIK complex
106170720
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_EIPR1
Ge1_WD40
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
WD40_like
eIF2A
PROPPIN
VPS8_N
VID27
LisH_PAC1
Beta-prop_DCAF12
LisH
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
106170720
NCBI-ProteinID:
XP_023931871
UniProt:
A0A1S3J6Y2
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MEGNSTETRPQAANGASTNGSSTDKQTLYAVLQYLRKNNLKETETLLKKEANIQDDDVPK
EQQSQNASEVSQALAAYKSEGDPSLYEDFYTNLKNFVEQSLDTYKGELAALLYPVFVQMY
LELIYNGHEVAGQIFFIKFSQEQESYYEDDLIKLSTVSKKEHMQGNQLMESFRTSRFVIR
MSRESYTQLKRYLQEKKQALLLNIIQERLFIDVYDGLPRTKQQIDVTSGGMSGEARREAN
KSKVLYGLLKEPDINISLDDDDDADGEDKDKPKKKKQKKDLLSMKKSKNDPNAPSNTRIP
LPELKDTDKIEKANAYKEALKRVKITQENKPSICFYTLLNSYENTTSIEISEDSSILSAG
FSDAVIKVWSTTPNKLRCMKTGVELDMIDKDVDDVLERMMDDRTASEYKTLCGHSGPVYS
TSLSMDKNFLVSSSEDGTVRLWSLLTWSNLVCYKGHISPVWDVTFSPHGHYFASASHDRT
ARLWATDHYQPLRIFAGHLSDVDSIQFHPNSNYIATGSSDRTVRLWDVLGGNCVRILTGH
KGAIHCLRFSPDGRYLASAGVDKTILLWDLANGTLVGQLKGHTGTIYSLSFSRDGSVLAS
GGMDNCVKLWQVSKVFNSQDSEGDLNVPANVDLNENYEFGSYQTKATPVLCTHFTRRNLL
LASGPYTPS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcaacagcaccgaaactcggccccaagcggcaaacggtgcgtcgacaaatggc
agttcaacagataagcagacgctatatgcagtgctgcagtaccttcgcaagaacaatctg
aaggaaactgaaactctgttaaagaaagaggcaaatatccaagatgatgatgttcccaaa
gaacagcagtcacaaaatgcttcggaagtttcacaggccctggctgcatacaagagtgaa
ggagacccatccctctatgaggatttctatacaaatttaaagaactttgtagaacaatca
ttggatacatacaagggtgaactggctgcactgctatacccagtgtttgtacagatgtat
ctggaattgatatataatgggcatgaagtagcaggccaaatatttttcataaaattctct
caagaacaagaaagctattatgaagatgatctcatcaagttgtcaacagtctctaaaaaa
gagcatatgcagggaaaccagctcatggaaagcttcagaactagcagatttgtcatcaga
atgtcaagggagtcctacacacaactaaaaaggtacctccaagagaagaaacaagcgctt
ttattaaatatcatacaagaacgcctatttattgatgtgtatgatggtttaccaagaacc
aagcagcagatagatgtcacatctggagggatgtctggggaagccaggagagaagccaac
aagtccaaggttctgtatgggcttctgaaggaacctgatataaacatatccttggatgat
gatgatgatgcagatggagaggataaagataaacctaagaaaaagaaacaaaagaaagat
ctgctgtccatgaagaaatcaaaaaatgacccaaatgctcccagtaacacaaggataccc
cttcctgaactcaaagacacagacaaaatagaaaaagccaatgcatacaaggaagccttg
aagagagttaaaataacacaagagaataaaccatctatttgtttttacactttgttgaat
tcttatgaaaacacaacatcaatagaaattagtgaagactccagcattctcagtgcaggt
ttcagtgatgctgtgatcaaagtttggtcaacaacccccaataagttgcggtgtatgaag
actggtgtggaattggatatgattgacaaggatgttgatgatgtattagaaagaatgatg
gatgatagaacagcctcagaatacaagactctatgtggccacagtgggccagtttattcc
accagtctcagcatggataaaaactttcttgtctcaagttcagaggatggaacagtaaga
ctgtggagcctattgacatggagtaatttagtatgctataaaggacacatttctccagtg
tgggatgtgacatttagtccacatggtcactactttgcctctgccagtcatgatagaaca
gcacggctgtgggccacagatcattatcagcctcttaggatctttgcaggccatttgtca
gatgtagatagtatacagtttcaccctaacagtaattacattgccacaggatccagtgat
cgcactgtaagactgtgggatgttctagggggcaattgtgtaagaatactcacgggacac
aagggtgctattcactgtttgcggttttcacctgatggaagatatctagcttcagcaggt
gtagataaaacaattttattgtgggatctggctaatgggaccttagtaggccagttgaag
ggtcatactggcactatctactcattgagtttcagtagagatggttcagttttagcctcg
ggtggcatggataactgtgtgaaactatggcaagtttcgaaagtcttcaatagtcaggac
agtgaaggggatctaaatgttccagcaaatgtagacttaaatgagaattatgaatttgga
tcatatcaaacaaaggcaacaccagtgctgtgtacgcatttcacaagaagaaatttgttg
ttagctagtgggccatatactccctcatga
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integrated database retrieval system
