KEGG   Lingula anatina: 106171499
Entry
106171499         CDS       T04921                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD2
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
lak  Lingula anatina
Pathway
lak04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:lak00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    106171499
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lak04121]
    106171499
Enzymes [BR:lak01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106171499
Ubiquitin system [BR:lak04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106171499
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     106171499
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd WDR55 EIF3I zf-C3HC4_2 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 zf-C3HC4 Beta-prop_WDR19_1st ANAPC4_WD40 Beta-prop_WDR35_TULP_N zf-RING_2 Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_HPS5 WD40_RFWD3 zf-RING_UBOX zf-RING_5 PEP5_VPS11_N Beta-prop_WDR75_1st Beta-prop_IFT122_1st zf-C3HC4_3 Beta-prop_DCAF12 RING_XB3-XBAT31 WD40_like Beta-prop_SCAP zf-C3HC4_4 Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_SPT8 zf-rbx1 bZIP_1 zf-RING_10 IBR_1 TRAF3_RING PIN_12 zf-P11 zf-RING_4 UvrD-helicase
Other DBs
NCBI-GeneID: 106171499
NCBI-ProteinID: XP_013407329
UniProt: A0A1S3JBR8
LinkDB
Position
Unknown
AA seq 641 aa
MSGPRTQQSNRRRKRPQPPVHNGLFGSYEDKDNDFVCPICFGMIDEAHMTKCGHSFCHRC
IKQSLDQSNRCPKCNFVMDTPDQIFPNFLLNELILKHRQKIEKKPKLEQQNGHITPVAVQ
DLLLDQDSLDLANVNFMLELLTQKKQRLESDSKIAQNQILKDFLQQLRQRKQEQLDRLTR
EVHIIDEDYSRVETALKEYKKKYPFTPLSPESSTLVNGLDQPLSAEPHCSSTSSSSGVSV
GSSSQEGFNGSRHDGGKQWLQTTMASRRKKVSQHFDDLQQCYFSTRLKEYGSGETCSTSS
DGLEDFSDSLSKFTQFSSFRPLATLSYASDIYNGSSIVSSIEFDRDCDYFAIAGVTKKIK
VFEYNMVISDAVDMHYPVTEMVCNSKISCVTWSAYHKGTMASSDYEGTITIWDAFSGVKH
RMFQEHEKRCWSVDFNRMDPKLIASGSDDAKVKLWSTDVEHSVASIEAKANVCCVKFNPE
SRYHLAFGSADHCVHYYDLRNTKVPLMTFKGHRKAVSYVKFVNSSDLVSASTDSQLKLWN
VNKPQCVRTFRGHVNEKNFVGLATDGDYIACGSENNSLCVYFRGLSKQLVTYKFDTVRSV
LEKDRKEEDTNEFVSAVSWRPGSNVVVAANSQGTIKILELV
NT seq 1926 nt   +upstreamnt  +downstreamnt
atgtctggaccaagaacgcagcaatcaaatcggcgtcggaaaagacctcagcctcctgtt
cataatggactttttgggtcgtatgaagacaaagataatgattttgtatgtcccatttgc
tttgggatgattgatgaagcacatatgacaaaatgtggacacagtttttgccacagatgt
ataaagcagagtttagaccagtccaatcgctgcccaaagtgtaactttgtgatggacaca
ccagatcaaatttttccaaatttcctcttaaatgaattgattttaaaacacagacaaaag
atagagaagaaacccaagttagaacaacagaatgggcatatcaccccagtagctgtccag
gaccttttacttgaccaggacagtctggatctggccaatgtcaactttatgctggagcta
ctgacacagaagaaacagagactagaatcagattccaaaatagctcaaaaccagattctt
aaagattttctccaacagctgagacagagaaaacaagagcaattagacagattaacaaga
gaagtacatatcattgatgaagattatagcagggtcgagacagcactgaaagaatataaa
aagaaatatccttttactccattatctcctgaatcctccacattagtaaatgggcttgat
caacctctgagtgcagagccccactgcagtagtactagtagtagtagtggtgttagtgtt
gggagcagtagccaggaaggattcaatgggagcagacatgatggtgggaaacagtggctg
cagaccactatggcttccaggaggaaaaaagtcagccaacattttgatgatctgcaacaa
tgttatttctcaactaggttaaaagaatatggatctggggagacatgtagtacctcttca
gatggactggaagattttagtgatagcctttccaaatttacccagttcagctcatttcgt
ccattagctactcttagttatgccagtgacatatataatggctcaagtatagtatcaagt
attgaatttgatcgtgactgtgattattttgctattgctggagtcaccaagaaaataaag
gtgtttgaatacaacatggtgatcagtgatgcagtggatatgcattaccctgtgacagag
atggtgtgcaattcaaaaataagctgtgtaacatggagtgcataccacaagggaacaatg
gccagttctgattacgaggggacaattacaatctgggatgcatttagtggggtgaagcac
aggatgtttcaggaacatgagaaaaggtgctggagtgtggatttcaacagaatggatcct
aaacttatagcttcaggttcagatgatgccaaagtgaagttgtggtcaactgatgtggag
cattctgtggccagtatagaggccaaggccaatgtgtgctgtgtcaagtttaaccccgaa
agcagatatcacttagcttttggttctgcagaccattgtgtacattactacgaccttcgc
aacactaaggtgccactcatgaccttcaaaggccatcggaaagctgtgtcatatgtgaaa
tttgtcaactcttcagacttggtttcggcgtccacagatagtcagttaaagctgtggaat
gtgaacaaacctcagtgtgtgaggacattcagaggccatgtcaatgagaagaactttgtt
gggttagccacagatggggattacattgcctgtgggagtgaaaataattctttgtgtgtt
tacttccggggactttccaaacagttggtcacctacaaatttgacacagtaagaagtgta
ttggagaaggacaggaaagaagaagacactaatgagtttgtcagtgcggtcagctggagg
ccaggatcaaatgttgtggttgctgcaaacagccaaggaacaatcaagattttagaactt
gtatga

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