Lingula anatina: 106171914
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Entry
106171914 CDS
T04921
Name
(RefSeq) collagen alpha-1(I) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
lak
Lingula anatina
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lak04147
]
106171914
00535 Proteoglycans [BR:
lak00535
]
106171914
00536 Glycosaminoglycan binding proteins [BR:
lak00536
]
106171914
Exosome [BR:
lak04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106171914
Proteoglycans [BR:
lak00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
106171914
Glycosaminoglycan binding proteins [BR:
lak00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106171914
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Endostatin
Collagen_trimer
Laminin_G_3
DUF1554
Motif
Other DBs
NCBI-GeneID:
106171914
NCBI-ProteinID:
XP_013407890
UniProt:
A0A1S3JBV5
LinkDB
All DBs
Position
Unknown
AA seq
1367 aa
AA seq
DB search
MGEPRESDLLQAIDVRPLTPHVTFISGFDGYPAFQIKHNADIQKPVLSYLPKVLFAEFSI
LVTVEQFSAEGGFLFAVVNPMSNVLQFGLNITEVVDGHQNIVLIYTELEKHKELEPTATA
IATFKVPQFVKQWSRFAILVYQESITLYLDCEEYETVTFEDRKPLMLIPGSTLYIGQGGA
FGGHFQGAVQELKIHPDHREAEDQCQENFIGSGSNPSDSGEDFTIASHLFSDFNGVTQPS
TGVTDSSGNSKGEVGNIGLLIPPPITPPPPEYPYYKGDKGEKGDTGPAGPKGDRGLTGQQ
GYSGLSGSKGEKGDRGSKGDQGPPGPPGPGVDSAVVPPPVVVGPGGRVVNASTSPLIIRG
RGPKGQKGSQGEAGFPGLDGLPGFPGQTGPKGTKGDVGAQGLPGIKGSKGEPGVFVGPLL
NSGEGVTGPKGDKGDKGDRGEIGMIGLDGLPGAKGDKGDSIVGPKGEPGRDGTTGPQGPP
GNTVFIEGSGDNEGPTGPKGEPGLDGREGPVGPKGQKGERGEVIQDNTVIVGPPGRDGVN
GSRGPPGLPGLPGRPGEHGEAGPRGLKGDRGDIGPVGEQGLPGPKGDRGEFGPQGLPGAR
GLPGPPGPPGITLESVGLTSSGDGDFGSGKPGPTGPRGFPGNPGTPGLQGEPGLMGQKGE
RGEKGEHGVKGERGFQGADGPQGFKGDMGDPGQPGVPGTPGLEGEPGVKGEKGEKGEKGV
GEPGPMGLMGPPGPPGLRGLPGLETESSGDIGLGEKGDPGPPGLPGIIGPPGYPGLKGEP
GLPGLDGRDGKDGKPGPPGSPGMPGLDGLDGRPGLPGPPGPPGQVSQGLSHSNQWTNQID
PGVINIPFGSLRKVESPEKGEKGDPGRPGIPGFCHASECQGLPGEPGRPGEPGPMGEIGM
PGFPGLRGAPGVGVPGPKGDQGAPGMKGEPGLPGRVEYVGNNGADGSPVTVVGPPGPKGD
TGDMGPNGLPGFPGKPGREGPAGPIGPPGLPGSPGLSGQDGYPGKTGKQGPKGEKGDRGL
RGPPGVVTTVDGETLTGGVPGPEGPPGERGPPGPPGERVIGPPGLPGPPGVGIVGPPGPP
GVGLPGPPGPPGDPGNGILLGEAGKPQEATTGLYPLKAVTVEDKSELHQLSNGVPVGSLV
YVMVEEKLYLRVGQGWQAVNLGYLEEIPEPTPPPTTTSAPLIPPPTGTEVVLGPRLHLIA
ANKPLSGAMHGISGADYQCYRQAKDAGMEGTFRAFLSSRVQNLDSVVFVKDRSVPIVNSK
DQLLFKSWDDIFKGVSFNNRIPILSFDGKDVMYDPKWPQKYIWHGADSTGQRMMDAYCDA
WDTSKTEMTGMASSLRSNHLLDQEKYACSNSFVVLCVEITHRRNVRK
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgggagaacctagggagtcagacttactacaagcaattgatgtgaggccattaacaccc
catgtaacattcattagtggatttgatggctatccagctttccagatcaagcataatgca
gacattcagaaaccagtgttatcatatctacctaaagttctttttgcagaattttccatt
ctggtcactgtcgaacagttctctgcagaaggaggatttttatttgcagtagtgaatccc
atgtcaaatgtccttcagtttggattgaatatcacagaggtggtggacggacaccaaaat
atagtacttatttacacagaactagaaaaacataaggagttggagccaacagccactgct
attgccacctttaaggtgccccaatttgtaaaacaatggtcgagatttgcaatcttggtt
tatcaggagagtattacactttacttagactgtgaggaatatgagacagtgaccttcgaa
gacaggaagccactgatgctcattcctggatctacgctgtacatagggcagggcggagca
tttggaggccatttccagggagctgtgcaagaactcaagatccaccctgatcaccgggag
gcagaggaccagtgccaagaaaattttataggcagtggatctaatccctcagacagtggg
gaagactttacgatagcaagtcatttattttctgatttcaatggggtgacacaaccatcc
acaggggtaactgacagcagtgggaatagtaaaggagaagtgggtaatattggactgctg
atacctcccccaatcaccccaccccctccagaatacccctactataaaggtgacaagggt
gaaaagggagatacgggtccagctggcccaaagggtgaccgaggtttaactggacagcaa
ggctactcaggactcagtggcagtaaaggagagaagggggatagaggaagcaagggtgac
cagggtccacccggcccccctggacctggagtggacagtgctgtggtgccgccccctgta
gtggtaggaccaggtggacgggtggtgaatgccagcacttcaccactgattatacggggg
agaggtcctaaaggccagaaaggttcccagggagaggctggtttccctgggctggatggt
ctgccagggtttcctgggcagactggacctaagggaactaagggagatgtaggtgcacag
ggtttgccagggattaaggggagtaagggagagcctggtgtgtttgtgggtccactcctt
aactctggggagggagtgacaggtcccaagggggacaagggagacaagggggacaggggt
gagataggaatgataggattggatggtttacctggagccaagggagacaagggtgacagt
attgttggtcctaaaggtgaacctggccgagatggcaccactggtccccaaggcccacca
gggaacactgtctttatagagggctctggtgacaatgaggggccaactgggccaaaagga
gagccaggcttggatggcagagagggcccagtagggccaaagggacagaaaggtgagagg
ggagaggtgatccaggacaatactgtcattgtgggaccccctggcagggatggagtcaat
gggagccgaggtccacctggattgcctggtcttcctggcagaccaggtgaacatggagag
gcaggacccaggggcttgaagggagacagaggtgatattgggccagttggagagcaaggt
ctgcctggtcctaaaggagaccgtggtgaatttgggccccagggtcttccaggagctcga
ggcctgccagggccaccaggacctccaggaattaccttggaatctgttggtttgacatct
tctggtgatggtgattttggtagtggtaaacctggccccactggcccccgggggttccct
ggtaaccccggcaccccaggactacagggagaacctggacttatgggacagaagggagaa
agaggagagaaaggagaacatggggttaaaggagaaaggggtttccagggggctgacggg
ccccagggtttcaagggagatatgggtgatccaggccagccaggtgtcccaggcacacca
ggccttgaaggagaacctggagtgaaaggagaaaagggtgaaaaaggtgagaagggtgtt
ggtgagcctggacccatgggtcttatgggtcctcctggccccccaggactcaggggatta
cctggactggagaccgagtccagtggagatataggacttggtgaaaagggagatccaggt
cccccaggattgccagggatcataggccccccagggtatccaggtctaaaaggagagcca
gggttaccagggctggacggcagggatgggaaggatggaaagccaggacctccaggtagc
ccaggaatgccgggacttgatggtctagatggacggccagggttgccaggaccccctggt
ccacctggccaagtgtcacaaggattgtctcacagtaatcagtggactaatcaaattgat
cctggagtaataaatatcccttttgggtcactgagaaaagttgagagccctgagaaagga
gagaaaggagacccaggaagacctggaattccaggattctgtcatgcctcagagtgtcaa
ggtctccccggagagccaggaagaccaggagaacctggaccaatgggagaaattggcatg
ccagggttccccggattaaggggagcccctggagtgggtgttcctggccccaaaggagac
caaggtgcccctgggatgaagggagaaccaggactcccaggaagagtggagtatgtgggc
aataatggggctgatgggagtccagtgacagtagttggccctccgggacctaaaggtgat
acaggagacatggggccaaatgggttgccaggctttccaggtaagccaggtagagagggt
ccagctggtcctataggacccccagggctaccaggttccccagggctatcaggacaagat
gggtaccctggcaagacagggaaacagggtcctaaaggtgaaaagggagatcgtggtcta
cggggcccccctggggttgtgaccactgtagatggggagactctgacaggtggggtgcca
ggaccagagggtccaccaggagaaaggggcccacctggtccaccaggggaaagagtcatt
ggaccaccaggtttacctggaccccctggagttggaatagttggccccccaggaccacca
ggagtggggttgcctggaccccctggcccacctggagaccctggaaatggtattcttctt
ggagaagcaggcaaacctcaggaagccaccacagggctgtaccctttgaaggcagtgact
gtggaggacaagtctgagctgcaccagctctctaatggtgtcccagtgggctccctggtc
tatgtgatggtggaagagaaactctacctcagagtggggcagggatggcaggctgtcaat
cttggttatttagaggaaattccagaaccaacaccacctcccaccaccacctcagctccc
ttgatccctcctcccacagggacagaggttgtactaggaccaaggctccatctgatagcg
gccaacaagcccctgtctggcgccatgcatggcatcagtggagcagactatcagtgttat
cgccaggctaaggacgctggcatggagggtaccttcagggccttcctctcctccagggtg
cagaatttagacagtgtggtgtttgtcaaggacagatctgtgccaattgtcaactcaaag
gaccagcttctgtttaaatcatgggatgatatattcaaaggggtatcattcaataataga
atacccatattgtcatttgatgggaaggatgtcatgtatgatccaaagtggccccaaaag
tacatttggcatggtgctgactccacggggcagcgtatgatggatgcttactgtgatgct
tgggacacatctaagacagaaatgacaggcatggccagctctcttagatcaaaccattta
ctagaccaggaaaaatatgcctgcagcaactcctttgttgtgttatgcgtggaaatcaca
caccggaggaatgtgaggaagtag
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integrated database retrieval system
