Lingula anatina: 106173379
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Entry
106173379 CDS
T04921
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
lak
Lingula anatina
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lak03009
]
106173379
Enzymes [BR:
lak01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
106173379
Ribosome biogenesis [BR:
lak03009
]
Eukaryotic type
Other ribosome biogenesis factors
106173379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NSUN5_N
NSUN5_fdxn-like
Methyltr_RsmB-F
FtsJ
Methyltransf_31
RsmF-B_ferredox
Cons_hypoth95
Motif
Other DBs
NCBI-GeneID:
106173379
NCBI-ProteinID:
XP_013409950
UniProt:
A0A1S3JHQ5
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All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MGLYQEAAGIIQQVRDKRGTVKSLVLSHRRVKNTKQLYALVCETLKYSDVLDQVIDAVQI
CKLEKTLQRRPLAQVVVYDLLIGKGLKSDGNLKAAVWKHKAALSAELARLKVRAKVASNE
GLLPEHVRKEAPLPRYVRVNLLKTNVEDVIGHFESEGYSFDQCSNNYNSYEEYLASVKSL
TGKHFLKDFHLPNVLVFPPGKDFHQHPLYTDGSIILQDKASCIPAHILSPLPGSNVIDCC
AAPGNKTSQLAAVMNNEGKLHAFDKDGARFKTLKSMLAKAGVQCAHLHHQDFLKVSPLDK
TYQDVEFVLVDPSCSGSGIVSRLNSITDKEDSTPTQRLGSLASFQASILKHALSFPNVRR
VVYSTCSTHREENEEVVQRVLLETGGQFHLTRALPNWTHRGLGDFEFGHLCLRASAQPDY
TNGFFVACLERCLGDKECLDCYHGDGDDKAQANQGNLNSMNTNVKRKQNSEGVVPHVYDK
KNCNQFSTKVVCNNGATGELSTSKKSRKRRKLNGDCEKAEEKLQNSVWESKERNDSVPGS
QSTFLLKSKKNGHKKRKRKKTKKPIV
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggggctgtaccaagaagctgcaggtattatacagcaggtacgagacaagagagggacg
gtgaagtcattggtactttctcacaggcgggtaaagaataccaagcagttgtatgccttg
gtctgtgagactctcaagtacagtgatgtattagaccaagtcatagatgctgtacagata
tgtaaactggagaagactttacagcgacggccactagcccaagttgtggtgtacgattta
ttgataggaaaagggttgaaaagtgatggaaatttgaaggctgcagtgtggaaacataag
gctgccctcagtgctgagctggccaggctaaaggttcgagctaaagttgccagcaatgaa
ggtcttcttcctgaacatgtgagaaaggaagccccactgccgagatatgtgagggtaaat
ctcctgaagaccaatgtggaagatgtcattggacactttgagtctgaaggatattcattt
gaccagtgcagcaacaactataacagctacgaggagtacttagcctctgtaaaatcccta
acgggaaaacatttcttgaaagacttccatcttcccaatgtccttgtgtttccacctggc
aaagatttccaccaacatcccctgtatactgacggcagcattatactgcaagacaaggcc
agttgcataccagctcacatcttgtcccccctgccaggaagtaatgtgatcgactgttgt
gctgcccccggcaacaagacctcccagctggctgctgtcatgaacaatgaagggaagttg
cacgcatttgacaaagatggtgcaaggttcaaaacactcaaatccatgttggccaaggct
ggggtacagtgtgcccatcttcaccaccaggacttcctgaaggtgtcaccactagacaag
acataccaggatgtggaatttgtacttgttgacccttcttgtagcggatcaggtatagtc
agcagacttaactccatcacagataaagaagattccacaccaacccagcgcctaggcagt
cttgccagtttccaagcctccatattgaaacatgctctctctttcccaaacgtcaggcgt
gtagtgtattccacctgttctactcatagagaagaaaacgaggaagtggttcaaagagtt
cttctagagactggtggtcagtttcacttgacccgtgctcttccaaactggacacacagg
ggcctgggggactttgaatttggacatttgtgcctcagggcctccgcacagccagactat
actaatggcttctttgtggcttgtcttgaacgttgccttggtgacaaggagtgtcttgac
tgttaccatggtgatggagatgataaggctcaggcaaatcaaggaaatttgaattcaatg
aatacaaacgtgaaaaggaaacaaaactcagaaggggttgtgccacatgtttacgacaag
aaaaattgtaatcaattttccacaaaggttgtgtgtaacaatggcgccacgggtgaatta
tccaccagtaaaaagtcaagaaaaaggagaaaactaaatggtgattgcgaaaaagcagaa
gaaaagttacagaattctgtttgggagagcaaagaaagaaatgactctgtaccagggagc
caaagtacatttttgctgaaatcaaaaaaaaacggccacaaaaagaggaaaaggaaaaag
actaagaaacctattgtttga
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