Lingula anatina: 106174155
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Entry
106174155 CDS
T04921
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
lak
Lingula anatina
Pathway
lak03030
DNA replication
lak03410
Base excision repair
lak03420
Nucleotide excision repair
lak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106174155
03410 Base excision repair
106174155
03420 Nucleotide excision repair
106174155
03430 Mismatch repair
106174155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lak03032
]
106174155
03400 DNA repair and recombination proteins [BR:
lak03400
]
106174155
DNA replication proteins [BR:
lak03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106174155
DNA repair and recombination proteins [BR:
lak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106174155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
AAA_30
AAA_16
Rad17
BRCT_2
PTCB-BRCT
AAA_14
RuvB_N
nSTAND3
AAA_33
AAA_5
AAA_19
Motif
Other DBs
NCBI-GeneID:
106174155
NCBI-ProteinID:
XP_013411030
UniProt:
A0A1S3JKT5
LinkDB
All DBs
Position
Unknown
AA seq
1066 aa
AA seq
DB search
MEYCASTDLEQDDQSRDRSPDVDPIKAAFQRQAQKAPTPKKTTPAKSTEEKKKQISVSDF
FGGGSVKKSERKTAALKRKAPDGDTPSMDKEEHDDVDFQRTLELLDEQQAKKTKIESTKV
TPSKSSQSRRHDSTPSKSITVAETPVRESPRRSSRTTTPQKEESRSSSRTPRKEESRSSS
KTPQKQTLTSDQTPQKSRSSSKGRSRSEVSVVEETPERSSPRTRSRSRSCTPAKSDTSSE
QSVRQSPRRKENESKTESSSLAKKLAAKARSRELMNTKEEEEKELKKSTPQKKTPSKAKT
PVKATPEKTESSPGTPATLERKGSSYKSYLTRAGPSSLGAKEVPEGGDNCLEGLTFVITG
VLESFERDDMKSAIEKYGGKVTGSISKRTSYVVVGRDAGESKLSKARQLGTKQLDEDGVL
DLIKTLPGKKSKYTVAAEKMVKEDSLNKSAVNEASGKKTSLKKEASVTTPGKTSLSESTP
TKSGQSEAKIGVDKPGESLLWVDKYKPTSMKQLIGQQGDKSNAKKLFHWLNNWHKNIASG
KKPVFSRFDSDGAGYRAALLSGPPGVGKTSAATVVCQEAGFSYIELNASDTRNKKSLEQE
VAEALSNHTLVDFFGSGQSGSSGQKHCLIMDEVDGMAGNEDRGGVQELVQLLKKTKIPII
CMCNDRNHPKIRTLANYCFDLRFYKPRLEQIKGPMLSLCFKEKIKVPPPALNEIIAGANH
DIRQIIHNLAMWSASDKSLTYEQAKSDANQAKKDMKIGPFDICRKVLVGGAETAGMTLAD
KQDLFFQDYDLTPLFVHENYLSTTPQAAQGNMKKHLRLISQAVDSMCDGDMVSKVIRGQQ
RWSLLTSQSIFSSVIPGDLMRGSLPQMVSFPSWLGKNSSKNKVDRILQELRTHMCLKVSA
NKEGLAMDYLPHLRSSLTQPLVQGDADGVPDVIHMMDEYSLLREDFDNILEVTQWSGRKD
PMASVPSKVKSAFTRAYNKEAHMTPYAVSNMGKKGKKSVSSAEDYPGLGEEEGENGGGGG
GDEDEEEEEDVTADAMIKVKKPSAAKGKGKGEGKGQGKGKGRGKKS
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggaatattgtgccagcactgatttagaacaagatgatcagagtagagacaggagtcct
gatgttgatcccatcaaggccgcctttcaacgacaggcccagaaagctccgacaccaaag
aaaactactccagctaaatcaacagaggagaagaaaaaacaaatcagtgtttcagatttc
tttggagggggcagtgtcaagaaatctgagaggaaaacggctgcgttgaagagaaaagct
cctgatggggacacccccagtatggacaaggaagagcacgatgacgtagacttccaaagg
acacttgaattactagatgaacaacaggctaagaagacaaagatagaaagcacaaaggtc
acgccaagcaaatctagtcagtcaagaagacatgacagcacgccatctaaatcaataaca
gtggcagaaacacctgtcagagagtctcctcggagaagttccagaactacaacaccccag
aaagaagaatctaggtcaagttcaaggacacctcgcaaagaagaatccaggtcaagttca
aagacgcctcagaaacaaacattgacatcagatcaaacaccccagaaaagtaggtcgtct
tctaaagggagatctcgtagtgaggtcagcgttgttgaagagacaccagagaggtcatca
ccaaggacacgttcaaggtcaaggtcatgtactccagctaaatcggatacatctagtgag
caaagtgttcgacagtcacctagaaggaaagaaaatgaaagtaaaactgaaagttcgtcc
ttggccaagaaactagctgccaaagctaggtcaagggaactcatgaacaccaaagaagaa
gaagaaaaggaattaaagaaatcaacacctcagaagaaaaccccatcaaaagccaaaacc
ccagtgaaagctactccagaaaaaactgagtccagtccaggtactcctgccactctggag
agaaagggcagcagttataaaagttacctgaccagagccggccccagcagtttgggagcc
aaggaagtacctgagggtggtgacaactgtttggaggggttgacatttgtcatcacgggt
gtcctggagtcgtttgaacgcgatgacatgaagagcgccatagagaagtatggcggcaag
gtgacgggaagcatcagtaagaggacaagttatgtggtggtggggagagacgcaggggaa
agcaagctgtctaaggcaaggcagttaggcaccaagcagctggatgaagatggtgtactg
gatttaatcaaaactcttcctggaaagaagtccaaatacactgtggcagcagagaagatg
gtcaaagaggattctttaaacaaatcggcagttaatgaagcttcagggaaaaagacatct
ctcaaaaaagaagcctctgttaccacaccaggaaaaaccagcttatcagagtccacccct
acaaaatctggccaatcagaagccaaaattggtgttgacaaaccaggagagagcttactt
tgggttgataagtacaaacctacaagtatgaagcagctgattggtcaacaaggagacaag
agtaatgctaagaagttgtttcattggttgaataattggcacaagaatattgccagtggg
aaaaagccagtattcagtcgttttgactcagatggtgctgggtacagagcagcattgtta
tcagggccgccaggagtggggaagacctcagcagccactgttgtatgccaggaggcaggt
ttctcatacatagaactgaatgcgtctgacaccaggaacaagaagagtctggagcaggag
gtggccgaggcacttagtaaccacactttggttgatttctttggcagtggtcagagcggt
tccagtggtcagaagcactgtctgattatggacgaggtagacgggatggccggcaatgaa
gacaggggaggagtacaggaactggttcagctgctgaagaagactaagattcctataata
tgtatgtgcaatgacagaaaccaccctaagattaggaccctagccaattactgctttgac
ttaagattttataaaccaagattggaacagatcaagggtcccatgctgtccctttgcttc
aaggagaagataaaagtgccacctcctgcattaaatgagatcatagcaggcgccaaccac
gatatcagacagataattcacaatctggccatgtggagtgccagtgacaagagcctaaca
tatgagcaagcaaaatctgatgccaaccaagccaagaaagatatgaagattggtccattt
gacatctgccgtaaggtgttggtgggaggagcggagactgctggaatgactctggcagac
aaacaggacctgttcttccaggattatgacctcacccctctgtttgtccatgaaaactac
ctgtcgacaactccccaggctgcacaaggtaatatgaagaagcaccttcgactgattagc
caggctgttgacagcatgtgtgacggtgacatggtgtcaaaggtcatcagaggtcaacag
aggtggagcctgctcacaagtcagtccatcttctctagtgttatccctggggatttaatg
aggggttctctcccccagatggtctcatttccaagctggttgggtaaaaactccagcaaa
aataaagtggacagaattctacaggagttgaggactcacatgtgtctcaaggtttctgcc
aacaaggaggggctggccatggactatctcccccacctgcgttcctccctcacccagccc
ctggtacaaggagacgcggacggtgtccccgatgtcatccatatgatggacgagtacagt
ctactgagagaagactttgataacattctggaggtgacgcagtggagtggacggaaggac
cccatggcctctgtcccttccaaggtgaagtctgccttcacccgagcctacaataaagaa
gcccacatgacgccctatgctgtgtctaacatggggaagaagggcaagaagagtgtgagc
agtgcggaggattaccctgggctgggggaggaggagggagagaacggaggaggaggagga
ggtgacgaggatgaggaagaagaggaggatgtgactgccgatgccatgataaaggttaaa
aagccatctgcagctaaggggaaaggaaagggagagggcaaaggtcaaggaaagggcaaa
ggtcgtggaaagaagtcataa
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