Lingula anatina: 106175294
Help
Entry
106175294 CDS
T04921
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit pan3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
lak
Lingula anatina
Pathway
lak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106175294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lak03019
]
106175294
Messenger RNA biogenesis [BR:
lak03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106175294
mRNA degradation factors
3'-5' decay
Pan complex
106175294
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf-CCCH_4
zf-CCCH_9
zf_CCCH_4
Torus
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
106175294
NCBI-ProteinID:
XP_013412688
UniProt:
A0A1S3JQM3
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MLSGPSNAKKSAVCRYFANTGSCFYGAECQFSHDAPDGLPENVGTGAPTTKFASGTAPDH
PQGIVVGREANNGDQYFTATFNGFNEFSPYSQRTNSGGRGVGMQDPSPSGPPGVDHLSSG
FSALNIEHSKTELKPGASEFIPKSSGTLTHSASVPSFPDYGVGPFKPGMPPASMAAQVMQ
QQGHSLSAGPSPAHTPTHSPLLSRRSKSPLVQLNTSVATSNAEGSGTPLQLQENVGGTTY
FYTHDEAVANQQRLAFPSYSEYASVPPHIAHMKLKSNMPSFFMPDEIKMELLNKQAVTLC
QVEGALDLPAEVDKYHNLVPLEPPAISPMQKSSTFGYPTSCYKAVNTEDGLTYCLRRIHG
FRHIHPRCLELIDKWKKIQHSNMVCLREVFTTKSFGDHSMVFVYDYYPRSETLMSRHFSA
PPMLNGYANPYNLDGAARPFSAGKGLNGPRQHAGLLPESLIWSYVVQLSSALRTIHTQGL
ACRVMDPTKILIVDKTRLRLNCVGIFDVLSFDPNQANPMAMMPHYQQEDLVSLGKVVLAL
ACNSVIGIQREHIQTSMELVARNYSADLKNLILYLLTNQNRMRSVNDIMPMIGARFYTQL
DAAQLRNDVLENELSKEVENGRLFRLLCKLGLINERPEFHLDPAWSETGDRYMLKLFRDF
LFHQVDENSQPWIDLAHVVQCLNKLDAGVPEKICLMSRDEQSVIVVTYAELKRCVESAFN
ELLAPSATQVEGGAQHASMVPPQGAAQPGMASIAGMHPGMPVSHGGMPGAAGMPGPMMPG
MS
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtgggccttcaaatgcgaagaagtctgcagtatgccgctattttgcaaataca
gggagctgtttctacggtgctgaatgtcagttttcgcatgatgctccagatggcttaccc
gaaaatgtagggacaggcgcgccaaccacaaaatttgcttcgggcaccgcacctgatcat
cctcaaggtattgttgtaggacgtgaggcaaacaacggagaccaatatttcactgcaact
ttcaatggttttaatgaattttcaccatactctcaaagaactaacagtggtggccgcggg
gtagggatgcaggacccctcaccctctggccctcctggtgtggaccatcttagctctggc
ttctctgcactcaatattgagcattctaagactgagctgaagccaggtgccagtgagttt
attcctaagagttcgggtactctgacccacagtgccagtgtcccctccttccctgactat
ggagtcggtccgttcaagccgggcatgccacccgcttccatggcagctcaggtcatgcaa
cagcaaggtcactcgttgtctgcagggccgagtccagcgcacacaccaacgcattcaccc
ttgctcagccggaggagcaagtcgccactggtgcaattgaacacttctgtagcgacatcc
aatgcagaaggttcaggaactcccttgcagctacaggagaatgtagggggcaccacctat
ttttatacccatgatgaggcagtggccaatcaacagagattggcatttccaagctacagt
gagtatgccagtgtgcctcctcacattgcccacatgaaactcaagtccaacatgccctcc
ttctttatgcctgatgagatcaagatggaattgttgaacaaacaggcagtgactttgtgt
caagtagagggggcattagatctccctgcagaggtggacaagtaccataacctggttccc
ctggaaccccctgccatcagccccatgcaaaagtccagtacctttggctatcctacctcc
tgttacaaggccgtgaacacggaggatggactcacctactgtctgaggaggatacatggc
ttccgccacattcacccccggtgtttggagttgatagataagtggaagaagatccagcac
tccaacatggtgtgcctcagagaagtgttcactaccaaatcttttggggaccactccatg
gtgtttgtatatgactactatccgaggtcagagactctgatgtcgcggcacttcagcgca
cctccgatgttaaatgggtatgcaaacccatacaatctagatggcgctgctaggcctttc
agcgcgggtaaagggttaaatggacctcgtcagcatgcaggcctcctcccagaaagcttg
atatggtcctatgtggtccagctgagctctgcattacggaccatccacacacaggggcta
gcatgccgcgtgatggacccgaccaagatacttattgtggacaaaaccaggttacgtttg
aactgtgtggggatctttgatgtgttgagttttgatcccaaccaggccaaccccatggcc
atgatgccccactatcagcaagaagacctggtgtctctgggcaaggtggtgctggccctg
gcctgtaattctgtcattggcattcagagagaacacatacagacatccatggaacttgtg
gcaagaaactattctgcagatctgaaaaacctcatactgtatttgctgaccaaccagaat
cgcatgcgcagtgtgaatgacattatgccaatgattggtgccaggttctacacgcagctg
gacgccgcccagttgagaaatgacgtcttggagaatgaactctctaaggaagttgaaaat
ggcagactgttcagacttttgtgcaagcttggtttgataaatgaaagaccagagtttcac
ttggatcctgcatggtcagaaacaggagacagatacatgctgaagttgttcagagacttc
ctgtttcaccaagtggatgaaaacagccagccttggattgatctggcacatgttgtgcaa
tgtctgaacaagcttgatgctggagttccagaaaagatctgcctgatgtcccgtgatgag
cagagtgtcattgtcgtcacatatgcagaattaaagaggtgcgtggagtctgccttcaat
gagctgctggcgccatcagcaacccaggtggaggggggtgctcaacatgccagtatggta
ccacctcaaggcgccgctcagcctggcatggcctccatcgcagggatgcatcctgggatg
ccagtgtcccatggtgggatgccaggagcagcagggatgccgggacctatgatgccaggg
atgtcttag
DBGET
integrated database retrieval system
