Lingula anatina: 106176873
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Entry
106176873 CDS
T04921
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
lak
Lingula anatina
Pathway
lak03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106176873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lak03041
]
106176873
Enzymes [BR:
lak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106176873
Spliceosome [BR:
lak03041
]
Complex A
U2 snRNP components
U2 related factors
106176873
Complex B
106176873
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
KH-I_KHDC4-BBP
CdAMP_rec
Terminase_6N
Motif
Other DBs
NCBI-GeneID:
106176873
NCBI-ProteinID:
XP_013414889
UniProt:
A0A1S3JXV8
LinkDB
All DBs
Position
Unknown
AA seq
1022 aa
AA seq
DB search
MPREGRSYRKRSRSRSTSRSPDRSKKRKSRSRSPKSRTRRSRSRERVRRSRSRDRDRSRR
SRSRERTQRSRRSRSRDRERDRDRDRDRDKNRDREKDKDRDRKPPEPSLLTKNRRSTSRE
RNKKSRSKTPEKVIEGAIKVKDEPMDKEAEQKRLEDEMQKRRERIEKWREDRKKTIVLPQ
INIAPPSKTWSLEDDADDEEEEVKQENGADDEDEIDPLDAYMQQVNDEVKHVKSNLTGAG
NQAGTKGASVSEPVSKVTFVTAVAKSKDDPAKKKGELMESNIDAMEYSSEEEEEGVEEMF
AGMQKKKKEFLAIDHSKIYYGPFKKDFYVEVPELTKMSQEEVDQLRDELEGIKVRGKGCP
KPIRNWAQCGVSKKIMECLKRYDYEKPTPIQAQAIPAIMSGRDVIGIAKTGSGKTLAFLL
PMLRHVLDQPPLEEGDGSIAIILTPTRELAMQITKECKKFTKNLGLQAVCVYGGTGISEQ
IAELKRGAEIIVCTPGRMIDMLAANNGRVTNCRRCTFVVLDEADRMFDMGFEPQVMRIVD
NIRPDRQTVMFSATFPRQMEALARKILTKPIEVQVGGRSVVCKDVEQHVVVIDDDSKFFK
LLELLGVYQEQGSVLVFVDKQEHADELMKNLMKHSYPCMSLHGGIDQYDRDSTITDFKQG
NVKLLVATSVAARGLDVKHLILVVNYDCPNHYEDYVHRCGRTGRAGNKGFAYTFITPEQE
RYANDIIKALEQSGAVVPADLQKLWDDYKARAEAEGKKIKSSSGFRGKGFKFDETEAHLA
DERKKLQKAALGLQDSDEEDAGIDIDQQIEDMFASKTRVTDVHQPMINQQAQPTASNQQK
LELAKRLASMINRQKNLGAEAQDITQQAAASILQGLPSQAPQVSAKTIAEQMAEKINAKI
GYRPPAEEEKEGQEQQGETFKRYELELEINDFPQTARWKVTSKEALAQICEYSEAGITVR
GTYFPPGKLPKEEERKLYLAIEATSELSIQKAKTEITRLIKEELVRLQNSYQPINRGRYK
VL
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtgaaggcagatcatacagaaagaggtctaggtctcgcagtacgtcgcggtct
ccagacagaagtaaaaagagaaaaagtagatcaagatcccctaaatcacgtacaagaaga
tctcgaagtcgtgagagagttaggcgctcgcgaagcagggacagagacagatccagaaga
tcacgctcaagagaaagaactcagaggtcaagaaggtccaggtcaagagatcgagaaaga
gacagagatcgtgatcgggatagagataaaaacagagacagagaaaaagacaaagacaga
gacagaaaaccaccagaaccaagtttgcttaccaaaaacaggagatcgacaagcagggaa
aggaataaaaagtctcgtagcaaaactccagagaaagttattgaaggagccataaaagtg
aaagatgagcccatggataaggaagctgagcaaaaaagattggaagacgaaatgcaaaaa
cgaagagagaggatagaaaaatggcgagaggatagaaagaaaaccattgtgttgccacaa
ataaatattgcccctcctagcaaaacctggagcttggaggatgatgcagatgatgaagaa
gaggaagttaagcaagaaaatggtgctgatgatgaggatgaaatagaccctcttgatgct
tacatgcagcaagtaaatgatgaagtcaaacatgtgaaatcaaacctgacaggagctggc
aatcaagcaggaactaaaggggccagtgtaagtgaacctgtgagtaaagtgacttttgtg
acagcagtggccaagtccaaagatgacccagccaagaagaaaggagagttgatggaaagc
aacatagatgccatggagtactcatcagaggaggaagaggagggtgtggaagaaatgttt
gcaggaatgcagaaaaagaaaaaggaatttttggccatagatcattccaaaatatactat
ggacctttcaagaaagacttttatgttgaagtgccagaactgacaaaaatgagccaggaa
gaggtagatcagctaagagatgagttagagggaattaaagtcaggggcaaaggttgtcct
aaacctattaggaactgggctcagtgtggtgtgagcaaaaagatcatggaatgtttaaag
aggtatgactatgaaaagcccaccccaatccaggctcaagccatccctgccattatgtca
ggaagagatgtgatagggatcgccaagactggtagtgggaaaactctggcctttctactg
cccatgttgaggcatgtgctggatcagccacctttggaggaaggagatggatctatagct
ataattttgactccaactagagaactagccatgcagattaccaaagagtgtaaaaaattc
accaaaaaccttggcctgcaggcagtgtgtgtatatggaggaacaggtatctcagagcag
atagcagagctgaaaagaggtgccgagatcattgtatgcactccaggaagaatgattgac
atgctggcagctaacaatggcagagttaccaactgccggcgttgcacatttgttgtactg
gatgaagcagacagaatgtttgatatgggctttgaaccacaggtgatgcgcatagtggac
aacattagaccagatcgccaaactgtgatgttttcagccacgtttcctcgccagatggag
gcccttgccaggaagatccttaccaagcccattgaagttcaggttggaggaagaagtgtt
gtgtgcaaggatgtagaacagcatgttgtggtcatagatgatgacagcaagttcttcaaa
ctgctagaactgctgggggtctatcaggaacagggcagtgtcctggtgtttgtggacaag
caggaacatgctgatgagctaatgaagaacctgatgaagcactcctatccctgtatgagt
ctccatggaggtattgaccagtatgacagagacagcaccatcactgactttaagcagggg
aatgttaaattgctggtagcaacttcagtggcagctcgtggcttggatgtgaagcatctt
atattagtggtgaattatgactgtcccaatcattatgaagactatgtacatagatgtggg
cgaactggccgagcaggaaacaaaggttttgcgtatacctttatcacccctgaacaggag
aggtatgccaatgacatcatcaaggcactggaacagtctggagctgtggtgcctgcagac
ctgcagaagttatgggacgattacaaggctagagcagaagcagaaggcaaaaagatcaag
agcagcagtggcttcagggggaaaggtttcaagtttgacgagacggaggcccacctggcg
gacgagagaaagaagttacagaaagctgctctaggattgcaagactcagatgaagaagat
gctggtattgatattgaccagcagattgaagacatgtttgccagtaagacccgagtgacc
gatgtccaccagcccatgattaaccagcaggcccagcccactgcgtccaaccaacagaaa
ctggagctggccaagagactggcctccatgatcaacaggcagaaaaacctgggagcggag
gcacaagatattacacagcaggctgctgcatccatcttacagggactaccatctcaggca
cctcaagtctctgccaagactatagcagagcagatggcagagaagatcaatgctaagata
gggtaccgtcctcctgcagaggaagagaaagagggacaggagcagcagggagaaacattt
aagagatatgaactggagctggagatcaatgacttcccacagactgccaggtggaaagtc
acctctaaggaagccctggctcagatctgtgagtactcagaggcaggtatcacagtgcgt
gggacatacttccctccaggtaaactacctaaggaagaggagcgcaagctatacctggct
atagaggccaccagtgagctgtccatacagaaggctaagacagagatcaccaggctgatc
aaggaggagctggttagactgcaaaattcttatcaaccaatcaacagaggcagatacaag
gttctatga
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integrated database retrieval system
