Lingula anatina: 106177183
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Entry
106177183 CDS
T04921
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
lak
Lingula anatina
Pathway
lak04382
Cornified envelope formation
lak04512
ECM-receptor interaction
lak04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106177183
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106177183
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106177183
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lak04147
]
106177183
00536 Glycosaminoglycan binding proteins [BR:
lak00536
]
106177183
Exosome [BR:
lak04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106177183
Glycosaminoglycan binding proteins [BR:
lak00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106177183
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106177183
NCBI-ProteinID:
XP_013415339
UniProt:
A0A1S3JZ35
LinkDB
All DBs
Position
Unknown
AA seq
1762 aa
AA seq
DB search
MGSWFGVNCREFLYLFLIVLIVVDLAVAAPQCTGCSDTCICKGTKGQKGEVGIPGLRGSQ
GLPGIMGPEGRPGPRGMRGDPGEDGAMGPKGLRGDMGMPGFTGVPGTPGLQGLDGPVGEP
GYPGCNGTKGEPGLPGFKGQPGQQGPRGIPGVDGPKGEQGEVTILGTGQGLRGDRGVDGK
PGQRGLPGIPGYNGEKGPRGEAGFQGPPGVPGEYGPKGIMGKDGEGIDGDPGPPGPQGPK
GIAGSAGIDKPPELVQGPKGDQGMKGDRGERGFNGSPGQPGRNGIPGLPGPKGEKGMFGP
SGRRGKRGKQGPLGPTGAKGMKGATGFDGIPGRDGFSGRRGDPGFRGPDGPQGDPGRRGS
DSPGPGGPGPIGRQGLPGIPGGPGIPGAPGLQGRDGPKGYRGDPGRDGLPGPRGSTGYSM
KGEIGPAGPPGFDGIPGDRGLPGLQGLPGEKGEEGQTVEGPPGFTGLPGRSGRGGPPGDL
GEIGFVGDPGLPWTGPIFPGPKGFPGPPGQKGDPGFQGRDGQRGLDGLKGPEGDDCGQCP
PGGKGEPGEQGREGANGIPGPPGFTGPPGFPGPKGNPGRPGARGLPGQQGRNGFEGLPGL
KGERGELIIPRPVPGLKGQPGDQGFQGLPGLPGRPGGNGDVGLPGLPGEKGMKGAVGRPG
LNGQDGPKGSPGQPGLRGAPGEDVQGFVGQRGDDGFPGPPGDPGLNGFPGDKGDAAPSVV
LERYRGDAGPPGSRGESGLDGATGIPGLPGIKGQPGESGFPGLRGREGDNGLRGPPGQRG
TPGAKGFPGMPGGNGIPGLPGPFGERGDPGPDGNRGPRGEPGRAVGTGYGQKGEPGFDGF
KGERGISGRDGPKGLAGRPGDVGLKGMKGENGLPGLPGIGLKGAPGENGLPGRRGDNGTP
GRDGFPGIPGTKGAPGSDGLGGIPGRDGEKGEAGNEGPSGPRGDQGLPGRDGNPGFDGLP
GRPGPKGEMGEEGNKGPDGKQGEPGLPGLPGDQGLPGDEGLPGPQGSRGGPGKKGERGRR
GLPGKNGRPGNPGTSGLPGDRGDPGLNGAKGQAGFPGLDGGPGFQGEKGDIGPGIPGQQG
PKGFIGRSGNPGRQGSPGRKGEMGQMGLPGPDGPRGENGIQGDRGFPGLDGRPGAKGEAG
EDGSQGLIGFPGDRGNPGPAGLDGLPGPGGDRGLDGLPGARGRKGTRGKDGDRGFDGFPG
NVGPKGDTGFAGREGLPGQPGLRGEDGFPGGSGQKGDRGEDGRPGSPGANGQSGEKGSRG
FPGSKGFPGLDAPPGQRGASGEPGIPGAPGLPGSQGPQGLPGFNGAPGLKGLDGEPGRSF
PGSKGFPGNPGPDGFNGLPGRKGDRGRDGNRGLPGMKGEEGLRGPQGNDGLRGNPGEQGR
DGVPGFQGAPGSKGFRGNPGLPGLDGDLGRRGDPGTPGFDGQPGIDGVRGPKGEVGEPAP
QFSRVGPKGFPGDPGPNGFPGLKGQPGDVGPNGFPGLPGMPGTKGFRGEDGPNGLDGRPG
NQGSRGLDGVGGFPGNRGSIGPPGMIGNPGLPGGNPGFLLTRHSQSTAIPDCPFGLRKMW
DGYSLLFVQGNGRATGQDLGSGGSCLRRFSTMPFMFCNLNNVCNVASRNDYSYWLSTPEP
MTPMMNPVRGGQIQPFISRCTVCEAPSLVMAVHSQSFQVPNCPRGWKGLWIGYSFAMQAA
AGAEGSGQALQSPGSCLEDFRYTPFIECHGKGTCNYYATDLSFWLAAVSERDNFRRPIPE
TIKAGDLKNKVSRCQVCMRVVR
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atggggagctggtttggagtaaactgtagagaatttctgtatttattcctgatcgttttg
atcgtcgtggatctggcagtagcggcgcctcagtgcactggttgttcagacacatgtatt
tgtaaaggaacaaaaggacaaaagggtgaggtggggatcccaggcctgagaggttcacag
ggattgccaggaatcatgggacctgaggggcgaccaggaccccggggaatgagaggagac
ccaggagaagatggagccatgggacccaagggattaaggggagacatgggtatgccagga
ttcactggtgttccaggaactccgggtctgcaaggtttggatggaccagtaggagagccg
ggttatccagggtgcaatggaaccaagggagagccaggtctgccagggtttaaaggtcag
ccaggccagcagggtcccaggggtataccaggagtggatggaccaaagggagagcaagga
gaggtgacaatcctgggcacagggcagggactccggggtgacagaggagtagacggaaaa
ccaggacagaggggactgcctggtattcctggatacaatggagagaagggacccagagga
gaggcaggttttcaggggccacctggtgtaccaggagagtatggtccaaaaggaattatg
ggaaaagatggggaaggaatagatggagatccgggtcctccaggtccccagggtcccaag
ggtatcgctgggtctgcaggaattgacaagcctccagagttggtccagggaccgaaagga
gaccaagggatgaagggagacaggggtgagagggggttcaatggatcgccaggacaacca
gggagaaacggtattccaggcctgccaggacctaaaggggagaagggaatgtttgggcca
tcaggacgcagaggtaagcgtggcaagcagggaccccttggccctacaggagctaaagga
atgaaaggagccacaggttttgatggtattcctggacgtgatggcttctctggtaggaga
ggagacccagggttcaggggtccagatggcccccagggagacccaggcaggcgaggttca
gatagtcctggcccaggaggtcccgggccaataggcagacaagggttgcctgggataccg
ggtggtccaggaattcctggtgccccaggccttcaaggcagagatggacccaagggttac
cgtggagacccgggaagggatggactcccaggaccaagaggaagtactgggtactccatg
aagggtgaaattggaccagcaggacccccgggtttcgatggtatcccaggggaccgtgga
ctgccaggtttacagggtttgccaggcgagaaaggcgaggaaggccagacagtagagggg
ccccctgggtttacaggactcccggggcggtctgggcgaggtggaccccctggggatctt
ggtgagatagggtttgtaggagaccctggtctaccctggacgggaccaatatttcctgga
ccaaaaggtttcccaggaccccctggacagaagggtgaccctgggttccagggaagggat
ggccagaggggactggatggattaaaagggccagagggagatgactgtggccagtgtcca
cctggagggaaaggagagcctggagagcagggaagagaaggtgctaatggcatcccaggt
cctcctggttttactggcccacctggtttcccaggcccgaaaggaaacccaggtcggcca
ggtgcccgaggtctgccaggacaacagggacgtaatgggtttgagggcctacccgggctg
aagggagagcgaggggaactgatcattccacggccagttcctggattaaaaggccagcca
ggagaccagggtttccagggattgccagggttgccgggacgaccaggcgggaatggtgat
gttgggttgcctgggttacctggggaaaaaggaatgaagggggcagtaggtcgtccaggg
ttaaatggccaagatggtcccaaaggctccccagggcagcctggcctgagaggggctcct
ggtgaagacgtgcaaggttttgtaggtcagcgcggtgatgatggttttcctgggcctcct
ggagaccctggtttgaatggatttccaggtgataaaggagatgctgctccatcagtggta
ttggaaaggtacagaggagatgcaggcccccctgggtccaggggagaatctggacttgat
ggggccacaggaataccaggcttgcctggaatcaaaggtcaacctggagagtcaggattc
cctgggctccgtggcagggaaggcgataacggtctccggggaccaccaggtcaaaggggc
actcctggagccaaggggttccctggaatgcctggaggaaatggcatcccaggtctgcca
ggtccttttggtgagagaggagaccctggtcctgatggcaacagaggaccacggggtgaa
cctggcagggcagttggcacaggatatgggcagaaaggagaaccaggttttgatgggttt
aagggcgagcgtggtatctcaggaagagatggacccaagggtttggcgggacggccaggg
gatgtgggattgaaggggatgaaaggagaaaatggattgccaggtcttccaggaattggc
ctgaagggggcgccaggagagaatggtttaccaggaaggaggggggacaatggaacaccc
ggacgtgatggcttcccaggcatacccggaaccaagggagccccaggatcagatggtctg
ggtggcatccctggcagagatggagagaagggtgaggcaggtaacgagggaccctcagga
cccaggggagaccagggtctaccaggcagggatgggaacccagggttcgatggtctcccc
ggacgccctggccccaagggagagatgggagaagaggggaacaagggacctgatgggaag
caaggagagcccggattgcctgggctgcctggagatcaaggtttaccaggagatgagggt
ctaccaggaccccagggatcacgaggaggcccagggaagaagggagagaggggcagaagg
gggcttccaggaaagaatggccgtcctggaaaccctgggacctctggactccccggggat
agaggagatccaggattaaatggtgccaagggccaggctgggttcccaggtttggacgga
ggtccagggttccaaggagagaagggtgatattggtccaggaatacctggccagcaagga
cccaagggcttcattgggcggagtggaaacccaggtcgtcaaggttcccctggtagaaag
ggagagatgggacagatgggtcttccaggtcctgatggtccccggggtgagaacggtatc
cagggagatagaggtttccctgggttagatggcaggcctggtgctaaaggggaggcagga
gaagatggaagtcaaggcctgataggattccctggggacaggggtaacccaggacctgca
ggtctggatggtcttccaggacctggtggtgacaggggcctggatggactccctggggcc
agaggcaggaaggggaccagaggcaaggatggggacagagggtttgatggattcccgggc
aacgttgggcccaagggtgatacaggatttgcaggcagggaggggttgccagggcaacct
ggattaagaggagaagatggattccctggagggagtggacagaagggtgaccgtggggag
gatggaagaccaggatctcctggagcaaatggccagagtggagaaaaaggctcaagaggt
ttcccaggaagcaaaggttttccaggattagatgcccctccaggccagcgtggtgcgtca
ggagagccaggaatccccggagccccaggtttgccaggctcccagggaccccaggggctg
cctggatttaatggagccccagggctgaaagggttggatggagagccagggagaagcttt
ccaggaagcaaaggatttccaggaaacccaggtcctgatggattcaatggattgcctggc
aggaagggggaccgagggagagatggtaatcggggtcttccagggatgaagggagaggag
ggactcaggggaccccagggaaacgatggacttagagggaacccaggggaacaggggaga
gatggcgtacctggttttcaaggtgctccaggtagcaaaggtttccgtggcaaccctggt
ctgccaggcctggatggtgatctaggtcgccgtggagaccctggaactccagggtttgac
ggacagccaggaattgatggtgttagaggtccaaagggagaagtgggagagcctgcgcct
cagtttagcagggttggacccaagggtttccctggagaccccggaccaaacggattccca
ggactcaagggacagcctggagatgtggggcccaatggtttccctggtcttccgggcatg
ccaggcacaaagggcttcagaggtgaagatggtcccaatggccttgatggtcgtcctgga
aaccaaggctcaaggggattggatggagttggcggtttccctggtaacagaggttccatt
ggcccacctgggatgatagggaatccagggctgcctgggggtaatccaggcttcctgctc
acaagacatagccaaagtacagcaattccagattgtccatttgggttgagaaaaatgtgg
gatggttactccctgttgtttgtccaaggtaatggcagggccacaggacaagatctaggc
tcaggaggcagttgtctgcgccgtttcagtaccatgccattcatgttttgtaacctgaac
aacgtgtgcaacgtggcttcaagaaatgactacagttactggctgtcaacaccagagccc
atgacacccatgatgaacccagtcagagggggacagatacagccatttattagcaggtgt
acagtttgtgaggctccctctctggtgatggctgttcatagtcagagcttccaggtgccc
aactgccccagaggatggaaggggctctggattggatacagctttgctatgcaagcagca
gcaggagcagaggggtcaggccaggctctccagtctccaggctcatgtttagaagacttc
agatacaccccttttatagaatgccatggaaaaggcacatgcaattactatgccacagac
cttagcttctggctggctgcagtgagcgagagagacaatttcaggcggcctataccagag
acaattaaagctggagatttgaaaaataaagtcagccgttgccaagtgtgtatgcgggtg
gttagatag
DBGET
integrated database retrieval system
