Lingula anatina: 106177184
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Entry
106177184 CDS
T04921
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
lak
Lingula anatina
Pathway
lak04382
Cornified envelope formation
lak04512
ECM-receptor interaction
lak04518
Integrin signaling
lak04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106177184
04518 Integrin signaling
106177184
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106177184
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106177184
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lak04147
]
106177184
00536 Glycosaminoglycan binding proteins [BR:
lak00536
]
106177184
Exosome [BR:
lak04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106177184
Glycosaminoglycan binding proteins [BR:
lak00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106177184
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106177184
NCBI-ProteinID:
XP_013415340
UniProt:
A0A1S3JY50
LinkDB
All DBs
Position
Unknown
AA seq
1796 aa
AA seq
DB search
MNETPEKSCRCSMHQPLLKPRKNRPTRVISYNSYSLLWKNYVWCAVLTLLLCAVTVSAQF
ENINPECAARCSQSGCRCIGEKGSRGAPGPTGPIGEQGYQGMEGPQGLTGPKGEKGDAGR
QGPTGPKGDRGKIGMPGFPGVNGIPGLHGSQGPRGIPGLDGCNGSMGEPGLPGLPGDVGP
EGPPGFPGARGQKGEPAIVDRGIKGAKGEPGYDGRPGPPGASGLNGSPGMKGEQGPPGPL
GPPGVRGPQGDKGNPGIGRQGQPGLPGPAGSRGPKGDPGSCPFVSGNTSMVVPIVGPKGE
VGMKGMKGEPGPIGNAGFDGASGLPGVPGTIGMKGEKGVPGPAGPRGKEGVPGLAGQPGF
KGDRGEDGFPGRPGQPGLKGDTGPSGPRGYKGNQGPPGPPGGKGNYGPPGPPGPQGPKGQ
PGPPGLPGLEGVPGNIGMKGESGGPGLPGPPGPQGFDGPKGEKGDRGPGGLSGRDGLPGT
PGQPGSKGEPGMKGEPGGSIRGQPGRDGLPGREGQKGDKGERGFKGNQGPPGNTPEGFRG
PQGDRGQKGQPGDSGRPGRDGLPGIPGDKGERGGICVPGFKGEKGGPGLDGLPGLPGERG
PQGDPGVAGDRGDDGSPGLPGLQGNPGAPGLDGRPGDVGPKGDSAVAITVPGPQGQKGEP
GPAGPEGRVGAPGNRGQPGVPGRNGLPGMKGDPGPPGPFGLDGRPGGPGVPGQQGPKGEP
GFGLPGQKGDSGRDGGKGNAGLPGQKGAKGEAGPANIVTKGERGFPGLPGPQGPKGFDGL
PGRNGAPGEKGQPGLDGQPGPKGNAGLPGLPGDPGPRGLTGQRGEKGDSGLPGLPGSAGQ
KGDRGFTGLTGPKGEQGPAGPVSQCIKGEPGLPGQPGGPGDQGLMGFPGMDGQPGLPGAP
GPKGDRGIDGLPGDSLAGVKGEPGRPGEPGLRGQPGANGLDGLPGAAGPKGEAGLPGLPG
QPGRDGPKGDVGPPGLPGLPGLEGPAGQPGRPGADGLPGGPGPKGAMGMLGFPGADGPPG
PPGPSGLPGMKGAVGGPGLPGLPGLDGPRGPKGGPGFDGNPGAKGQPGQPGFPGSKGDAG
LPGQPGLPGDRGNPGLPGVPGPKGNAGEPGIGLPGQRGLPGDPGLDGLPGQNGPPGPKGG
DGLPGFPGMKGDRGLNGLPGSPGQPGADGLPGMKGDRGQSGLPGPPGQKGEVGPAGPSGF
PGAKGNAGQPGQPGLEGAQGPPGEDGLPGQPGQPGRDGPKGDRGLPGLEGRPGTPGAKGD
SGLPGLPGNPGAKGESGFPGLNGRPGPKGEKGFTGQRGLPGQPGDPGRDSVGLKGEAGLP
GLPGLDGPSGPKGEAGRPGLDGLPGMKGTPGRDGLPGPQGEKGEPGLRGSDGLPGQPGLE
GPPGLTGLPGPKGEAGNPGLPGFDGLPGQPGPQGLPGRDGQPGAKGESGQPGGNGLPGLP
GMPGPKGDIGPGGRNGLPGLPGAQGPPGFKGEPGQAGPQPLRGDKGEPGQRGLDGLPGMK
GERGPSGLPGLPGPKGAFGLTGDRGLPGLPGAEGRPGERGLPGSPGLPGLPGDIGPPGPK
GDLGPPGQTLPTGYLLVKHSQSTNIPKCPFGNTQLWEGYSLLYIEGNERAHNQDLGFAGS
CLQRFSTMPFLFCNINNVCNYASRNDKSYWLSTNAPIPMMPVMEDDIRPYISRCVVCDAP
TNVIAVHSQDLNVPRCPQGWSELWIGYSFAMHTAAGAEGGGQSLISPGSCLEDFRATPFI
ECNGARGTCHYFANKFSFWLTTIDTQSQFSDPQPQTLKAGNLRSRVSRCAVCQRNP
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaacccctgagaagtcttgccgttgcagcatgcaccaacctctgcttaaacct
cggaaaaacagaccaactagagtaatttcatacaattcatatagcttgctttggaaaaat
tacgtttggtgtgctgtgctgacgttgctgctctgcgcggtcacagtctcagcgcaattt
gaaaatattaacccagaatgtgctgccaggtgctcacagtcaggatgtaggtgtatagga
gagaaaggatccaggggtgcccctggccccacaggtccaataggagagcagggataccag
ggcatggagggccctcagggtctaacaggacctaagggagagaagggagacgcaggaaga
caaggccctacaggacctaaaggtgataggggcaagataggaatgccaggtttcccagga
gtcaatggaattccaggtctccatggttctcagggtccaagaggaattccagggttggat
ggttgtaatggcagtatgggggagccaggtctgcctggtcttccaggagatgttggccca
gagggtccaccaggatttccaggagccagaggacagaaaggtgaaccagccatagtggac
aggggaatcaaaggagctaagggtgaaccaggatatgatggccgacctggaccaccaggt
gcttcaggattaaatggttccccaggtatgaagggagaacaaggaccaccaggacccctg
ggtcctccaggagtgagggggccacaaggtgataaaggtaacccaggtataggaagacag
ggacagccagggttacctgggccagctggttcacgaggtcccaagggagaccccggatct
tgtcctttcgtatccggtaatacctccatggtagtgcccatagttggaccaaagggagag
gtgggaatgaagggaatgaagggtgagccaggacctataggaaatgcaggctttgatggt
gccagtggactacctggtgttccaggaactattggtatgaagggagagaagggtgttccg
ggaccagctggacctaggggtaaagaaggagtgccaggattagcaggacagccaggattc
aagggtgaccggggagaggatgggttcccagggcgtccaggccagccaggattgaaggga
gataccggccccagtggcccacgtggctataaaggaaaccaaggacccccaggtccccct
ggcggtaaaggtaactatgggcccccaggtcccccaggaccacagggccccaagggccaa
ccagggcctccaggtctgccaggtctggaaggagtcccgggaaacattggtatgaaaggg
gagagtggagggccaggtctgcccggacccccaggaccacagggatttgatggacccaag
ggagaaaagggagatagagggcctggaggtttatcaggtcgggatggtctccctggcacc
ccagggcagccgggatccaagggagaaccagggatgaagggagagccaggagggtccata
cggggacaaccagggcgggatggactaccaggacgcgagggacagaaaggtgacaaggga
gagaggggatttaaaggcaaccaaggcccccctggtaacacacctgaagggttcaggggt
ccccagggtgaccgtggtcagaaaggtcagccaggagatagtggacgcccgggtagagat
ggactgcctggaatacctggagacaaaggtgaaagaggtgggatatgtgtcccagggttc
aagggtgagaaggggggcccagggttggatggtctgccaggtctaccaggagagagagga
cctcagggagaccctggggtggctggagacagaggagacgatggttcaccaggcctgcct
gggttacagggaaatccaggagccccaggtttggatggtcgaccaggagatgttggacct
aaaggtgactctgctgtagccattactgtcccaggccctcaaggtcagaaaggcgagcca
ggaccagcaggaccagaggggcgtgtgggtgcacctggtaacagagggcagccaggggta
cctgggagaaatgggctacctggcatgaagggagaccccggtccaccaggtccatttggc
ttggacggtcgtccaggaggaccaggggtgccaggccagcagggacctaagggagaacca
gggttcggcctccctggccagaagggagacagtggtagagacggtggtaaaggaaacgct
gggttacctggacagaagggagcaaagggagaagcaggtccagctaatatagtgaccaag
ggtgagcgtggattcccgggtctccccggaccccagggacccaagggatttgatggactg
ccaggacgcaatggggcaccaggtgagaagggccagccaggacttgatgggcagccagga
cccaagggtaacgctgggctgccaggtctgccaggagatccaggacccagaggattaact
ggacagcgtggagagaaaggagattcaggacttccaggactaccaggatcagcaggccag
aaaggagatcgaggattcacaggactcaccgggccaaaaggtgagcagggtcctgctggt
ccagtcagccagtgtattaagggagagcctggtctgccaggacagccaggaggtccaggt
gatcagggcttaatgggattcccagggatggatggtcagccaggtttgccaggtgccccg
ggtcctaaaggagaccgtggtatagatggcctgccaggcgattctctggccggggtgaag
ggtgaaccgggtcgtccaggagaaccaggactcagaggacagcctggggctaatggactg
gatggactgccaggtgctgctggaccaaaaggtgaggccggtcttcctggtctaccaggt
caacccggccgagatggacctaaaggggacgttggacctccaggactccctggtctgccg
ggactggagggtccagctggacaacctggcagacctggggcagacggactacctggagga
ccaggtcccaaaggtgctatgggcatgttaggattcccaggagctgacggcccccctgga
cctccaggaccctcaggactaccaggaatgaagggagccgtaggaggaccagggttgcca
gggttaccaggcctggacggacctagaggaccaaaaggtggccctggttttgacggcaac
cctggggccaagggtcagcctggacaaccaggatttccaggttcaaaaggagatgcaggg
ttacctggacaaccaggtctcccaggagacaggggcaacccaggtctgccaggtgtccca
ggaccaaagggcaatgcaggagagccaggtattggtctacctggacagagaggtttacct
ggtgatcctggtttggatggtttacctggacagaatggtccacctggccctaaaggtgga
gatggtctaccaggcttccctggcatgaagggagacaggggcttaaatggactcccaggc
agccctggacaacctggggctgatggactgccaggaatgaaaggtgaccgtggtcagtca
ggcctgccaggtcccccaggacagaaaggtgaggtgggaccagcggggccctcaggtttc
cctggagccaagggtaatgcgggacaaccaggacaacctggcctagagggagctcaggga
ccaccgggagaggacggactgcctggacaacccggacaaccaggtcgagacggtcccaaa
ggtgaccgtggcttacctggcctagagggtagaccaggtaccccaggggccaagggagac
tctggactgccagggctacctggtaacccaggtgccaagggagagtctggattcccagga
ttgaatggaaggcctggacctaagggagagaaaggcttcacaggacagaggggacttccg
ggacaacctggtgatcctgggcgggactctgtgggactgaaaggtgaggcaggccttcca
ggtctcccaggactggatggtccatcaggtcccaagggagaggcgggacgcccaggtctg
gatggcctcccagggatgaaagggaccccagggagggatggactgccaggacctcaaggg
gagaagggagagcctgggctgagaggcagtgatggtctgccgggacagccgggactggag
ggacccccaggtctgactgggttaccaggacctaagggagaggccggcaacccgggactg
ccaggttttgatggtctgccaggacaaccaggtccacagggactgccaggaagagatggt
cagccaggtgcaaagggagaaagtggtcaacctggagggaatggtttacctggattacct
gggatgccaggacccaagggtgatattggcccaggaggaagaaatggacttcctggatta
ccaggtgcccagggacccccaggtttcaagggagagccgggtcaggcaggaccacagcct
ctgaggggagacaagggagagccaggtcagagagggctggatggtctccctggaatgaag
ggagagaggggaccaagtggtctacctggactaccaggtcccaagggcgcatttggtttg
acaggagacagaggcttgccaggactcccaggagcagaaggacgtccaggagaaagagga
ctaccaggttctccgggtctaccaggattgccaggtgacattggtcccccaggacctaaa
ggagatttgggcccccctggacaaaccctgcccactggctatctcctggtcaagcacagc
cagagcactaacatccccaagtgcccctttggcaacacccagttgtgggaggggtacagt
ttactatatattgaaggcaatgagagggcccacaaccaggatttaggtttcgcaggctct
tgtctgcagagattcagcactatgcccttcctgttctgtaacatcaacaacgtgtgcaat
tacgccagcagaaacgacaagtcctactggctgtccaccaacgcccccatccccatgatg
cctgtgatggaggatgacatcaggccctacatcagcaggtgtgttgtatgtgatgcaccc
accaatgtgatagctgtccacagccaggatttgaacgtgccaaggtgccctcagggatgg
agcgaactttggattgggtatagctttgcaatgcacacggcagcaggagcagaaggtggc
ggccagagtctgatcagtcccggcagctgtctcgaggacttccgtgcaacacccttcatc
gagtgtaacggtgcaagaggcacttgtcattatttcgctaacaaattcagtttctggctg
acaactatagatactcagtctcagttctctgatccacaaccgcaaactctcaaagctggc
aatttacgaagccgggtcagccgatgcgcagtctgtcagaggaatccatag
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integrated database retrieval system
