Lingula anatina: 106177184
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Entry
106177184 CDS
T04921
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
lak
Lingula anatina
Pathway
lak04512
ECM-receptor interaction
lak04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106177184
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106177184
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lak04147
]
106177184
00536 Glycosaminoglycan binding proteins [BR:
lak00536
]
106177184
Exosome [BR:
lak04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106177184
Glycosaminoglycan binding proteins [BR:
lak00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106177184
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106177184
NCBI-ProteinID:
XP_013415340
UniProt:
A0A1S3JY50
LinkDB
All DBs
Position
Unknown
AA seq
1796 aa
AA seq
DB search
MNETPEKSCRCSMHQPLLKPRKNRPTRVISYNSYSLLWKNYVWCAVLTLLLCAVTVSAQF
ENINPECAARCSQSGCRCIGEKGSRGAPGPTGPIGEQGYQGMEGPQGLTGPKGEKGDAGR
QGPTGPKGDRGKIGMPGFPGVNGIPGLHGSQGPRGIPGLDGCNGSMGEPGLPGLPGDVGP
EGPPGFPGARGQKGEPAIVDRGIKGAKGEPGYDGRPGPPGASGLNGSPGMKGEQGPPGPL
GPPGVRGPQGDKGNPGIGRQGQPGLPGPAGSRGPKGDPGSCPFVSGNTSMVVPIVGPKGE
VGMKGMKGEPGPIGNAGFDGASGLPGVPGTIGMKGEKGVPGPAGPRGKEGVPGLAGQPGF
KGDRGEDGFPGRPGQPGLKGDTGPSGPRGYKGNQGPPGPPGGKGNYGPPGPPGPQGPKGQ
PGPPGLPGLEGVPGNIGMKGESGGPGLPGPPGPQGFDGPKGEKGDRGPGGLSGRDGLPGT
PGQPGSKGEPGMKGEPGGSIRGQPGRDGLPGREGQKGDKGERGFKGNQGPPGNTPEGFRG
PQGDRGQKGQPGDSGRPGRDGLPGIPGDKGERGGICVPGFKGEKGGPGLDGLPGLPGERG
PQGDPGVAGDRGDDGSPGLPGLQGNPGAPGLDGRPGDVGPKGDSAVAITVPGPQGQKGEP
GPAGPEGRVGAPGNRGQPGVPGRNGLPGMKGDPGPPGPFGLDGRPGGPGVPGQQGPKGEP
GFGLPGQKGDSGRDGGKGNAGLPGQKGAKGEAGPANIVTKGERGFPGLPGPQGPKGFDGL
PGRNGAPGEKGQPGLDGQPGPKGNAGLPGLPGDPGPRGLTGQRGEKGDSGLPGLPGSAGQ
KGDRGFTGLTGPKGEQGPAGPVSQCIKGEPGLPGQPGGPGDQGLMGFPGMDGQPGLPGAP
GPKGDRGIDGLPGDSLAGVKGEPGRPGEPGLRGQPGANGLDGLPGAAGPKGEAGLPGLPG
QPGRDGPKGDVGPPGLPGLPGLEGPAGQPGRPGADGLPGGPGPKGAMGMLGFPGADGPPG
PPGPSGLPGMKGAVGGPGLPGLPGLDGPRGPKGGPGFDGNPGAKGQPGQPGFPGSKGDAG
LPGQPGLPGDRGNPGLPGVPGPKGNAGEPGIGLPGQRGLPGDPGLDGLPGQNGPPGPKGG
DGLPGFPGMKGDRGLNGLPGSPGQPGADGLPGMKGDRGQSGLPGPPGQKGEVGPAGPSGF
PGAKGNAGQPGQPGLEGAQGPPGEDGLPGQPGQPGRDGPKGDRGLPGLEGRPGTPGAKGD
SGLPGLPGNPGAKGESGFPGLNGRPGPKGEKGFTGQRGLPGQPGDPGRDSVGLKGEAGLP
GLPGLDGPSGPKGEAGRPGLDGLPGMKGTPGRDGLPGPQGEKGEPGLRGSDGLPGQPGLE
GPPGLTGLPGPKGEAGNPGLPGFDGLPGQPGPQGLPGRDGQPGAKGESGQPGGNGLPGLP
GMPGPKGDIGPGGRNGLPGLPGAQGPPGFKGEPGQAGPQPLRGDKGEPGQRGLDGLPGMK
GERGPSGLPGLPGPKGAFGLTGDRGLPGLPGAEGRPGERGLPGSPGLPGLPGDIGPPGPK
GDLGPPGQTLPTGYLLVKHSQSTNIPKCPFGNTQLWEGYSLLYIEGNERAHNQDLGFAGS
CLQRFSTMPFLFCNINNVCNYASRNDKSYWLSTNAPIPMMPVMEDDIRPYISRCVVCDAP
TNVIAVHSQDLNVPRCPQGWSELWIGYSFAMHTAAGAEGGGQSLISPGSCLEDFRATPFI
ECNGARGTCHYFANKFSFWLTTIDTQSQFSDPQPQTLKAGNLRSRVSRCAVCQRNP
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaacccctgagaagtcttgccgttgcagcatgcaccaacctctgcttaaacct
cggaaaaacagaccaactagagtaatttcatacaattcatatagcttgctttggaaaaat
tacgtttggtgtgctgtgctgacgttgctgctctgcgcggtcacagtctcagcgcaattt
gaaaatattaacccagaatgtgctgccaggtgctcacagtcaggatgtaggtgtatagga
gagaaaggatccaggggtgcccctggccccacaggtccaataggagagcagggataccag
ggcatggagggccctcagggtctaacaggacctaagggagagaagggagacgcaggaaga
caaggccctacaggacctaaaggtgataggggcaagataggaatgccaggtttcccagga
gtcaatggaattccaggtctccatggttctcagggtccaagaggaattccagggttggat
ggttgtaatggcagtatgggggagccaggtctgcctggtcttccaggagatgttggccca
gagggtccaccaggatttccaggagccagaggacagaaaggtgaaccagccatagtggac
aggggaatcaaaggagctaagggtgaaccaggatatgatggccgacctggaccaccaggt
gcttcaggattaaatggttccccaggtatgaagggagaacaaggaccaccaggacccctg
ggtcctccaggagtgagggggccacaaggtgataaaggtaacccaggtataggaagacag
ggacagccagggttacctgggccagctggttcacgaggtcccaagggagaccccggatct
tgtcctttcgtatccggtaatacctccatggtagtgcccatagttggaccaaagggagag
gtgggaatgaagggaatgaagggtgagccaggacctataggaaatgcaggctttgatggt
gccagtggactacctggtgttccaggaactattggtatgaagggagagaagggtgttccg
ggaccagctggacctaggggtaaagaaggagtgccaggattagcaggacagccaggattc
aagggtgaccggggagaggatgggttcccagggcgtccaggccagccaggattgaaggga
gataccggccccagtggcccacgtggctataaaggaaaccaaggacccccaggtccccct
ggcggtaaaggtaactatgggcccccaggtcccccaggaccacagggccccaagggccaa
ccagggcctccaggtctgccaggtctggaaggagtcccgggaaacattggtatgaaaggg
gagagtggagggccaggtctgcccggacccccaggaccacagggatttgatggacccaag
ggagaaaagggagatagagggcctggaggtttatcaggtcgggatggtctccctggcacc
ccagggcagccgggatccaagggagaaccagggatgaagggagagccaggagggtccata
cggggacaaccagggcgggatggactaccaggacgcgagggacagaaaggtgacaaggga
gagaggggatttaaaggcaaccaaggcccccctggtaacacacctgaagggttcaggggt
ccccagggtgaccgtggtcagaaaggtcagccaggagatagtggacgcccgggtagagat
ggactgcctggaatacctggagacaaaggtgaaagaggtgggatatgtgtcccagggttc
aagggtgagaaggggggcccagggttggatggtctgccaggtctaccaggagagagagga
cctcagggagaccctggggtggctggagacagaggagacgatggttcaccaggcctgcct
gggttacagggaaatccaggagccccaggtttggatggtcgaccaggagatgttggacct
aaaggtgactctgctgtagccattactgtcccaggccctcaaggtcagaaaggcgagcca
ggaccagcaggaccagaggggcgtgtgggtgcacctggtaacagagggcagccaggggta
cctgggagaaatgggctacctggcatgaagggagaccccggtccaccaggtccatttggc
ttggacggtcgtccaggaggaccaggggtgccaggccagcagggacctaagggagaacca
gggttcggcctccctggccagaagggagacagtggtagagacggtggtaaaggaaacgct
gggttacctggacagaagggagcaaagggagaagcaggtccagctaatatagtgaccaag
ggtgagcgtggattcccgggtctccccggaccccagggacccaagggatttgatggactg
ccaggacgcaatggggcaccaggtgagaagggccagccaggacttgatgggcagccagga
cccaagggtaacgctgggctgccaggtctgccaggagatccaggacccagaggattaact
ggacagcgtggagagaaaggagattcaggacttccaggactaccaggatcagcaggccag
aaaggagatcgaggattcacaggactcaccgggccaaaaggtgagcagggtcctgctggt
ccagtcagccagtgtattaagggagagcctggtctgccaggacagccaggaggtccaggt
gatcagggcttaatgggattcccagggatggatggtcagccaggtttgccaggtgccccg
ggtcctaaaggagaccgtggtatagatggcctgccaggcgattctctggccggggtgaag
ggtgaaccgggtcgtccaggagaaccaggactcagaggacagcctggggctaatggactg
gatggactgccaggtgctgctggaccaaaaggtgaggccggtcttcctggtctaccaggt
caacccggccgagatggacctaaaggggacgttggacctccaggactccctggtctgccg
ggactggagggtccagctggacaacctggcagacctggggcagacggactacctggagga
ccaggtcccaaaggtgctatgggcatgttaggattcccaggagctgacggcccccctgga
cctccaggaccctcaggactaccaggaatgaagggagccgtaggaggaccagggttgcca
gggttaccaggcctggacggacctagaggaccaaaaggtggccctggttttgacggcaac
cctggggccaagggtcagcctggacaaccaggatttccaggttcaaaaggagatgcaggg
ttacctggacaaccaggtctcccaggagacaggggcaacccaggtctgccaggtgtccca
ggaccaaagggcaatgcaggagagccaggtattggtctacctggacagagaggtttacct
ggtgatcctggtttggatggtttacctggacagaatggtccacctggccctaaaggtgga
gatggtctaccaggcttccctggcatgaagggagacaggggcttaaatggactcccaggc
agccctggacaacctggggctgatggactgccaggaatgaaaggtgaccgtggtcagtca
ggcctgccaggtcccccaggacagaaaggtgaggtgggaccagcggggccctcaggtttc
cctggagccaagggtaatgcgggacaaccaggacaacctggcctagagggagctcaggga
ccaccgggagaggacggactgcctggacaacccggacaaccaggtcgagacggtcccaaa
ggtgaccgtggcttacctggcctagagggtagaccaggtaccccaggggccaagggagac
tctggactgccagggctacctggtaacccaggtgccaagggagagtctggattcccagga
ttgaatggaaggcctggacctaagggagagaaaggcttcacaggacagaggggacttccg
ggacaacctggtgatcctgggcgggactctgtgggactgaaaggtgaggcaggccttcca
ggtctcccaggactggatggtccatcaggtcccaagggagaggcgggacgcccaggtctg
gatggcctcccagggatgaaagggaccccagggagggatggactgccaggacctcaaggg
gagaagggagagcctgggctgagaggcagtgatggtctgccgggacagccgggactggag
ggacccccaggtctgactgggttaccaggacctaagggagaggccggcaacccgggactg
ccaggttttgatggtctgccaggacaaccaggtccacagggactgccaggaagagatggt
cagccaggtgcaaagggagaaagtggtcaacctggagggaatggtttacctggattacct
gggatgccaggacccaagggtgatattggcccaggaggaagaaatggacttcctggatta
ccaggtgcccagggacccccaggtttcaagggagagccgggtcaggcaggaccacagcct
ctgaggggagacaagggagagccaggtcagagagggctggatggtctccctggaatgaag
ggagagaggggaccaagtggtctacctggactaccaggtcccaagggcgcatttggtttg
acaggagacagaggcttgccaggactcccaggagcagaaggacgtccaggagaaagagga
ctaccaggttctccgggtctaccaggattgccaggtgacattggtcccccaggacctaaa
ggagatttgggcccccctggacaaaccctgcccactggctatctcctggtcaagcacagc
cagagcactaacatccccaagtgcccctttggcaacacccagttgtgggaggggtacagt
ttactatatattgaaggcaatgagagggcccacaaccaggatttaggtttcgcaggctct
tgtctgcagagattcagcactatgcccttcctgttctgtaacatcaacaacgtgtgcaat
tacgccagcagaaacgacaagtcctactggctgtccaccaacgcccccatccccatgatg
cctgtgatggaggatgacatcaggccctacatcagcaggtgtgttgtatgtgatgcaccc
accaatgtgatagctgtccacagccaggatttgaacgtgccaaggtgccctcagggatgg
agcgaactttggattgggtatagctttgcaatgcacacggcagcaggagcagaaggtggc
ggccagagtctgatcagtcccggcagctgtctcgaggacttccgtgcaacacccttcatc
gagtgtaacggtgcaagaggcacttgtcattatttcgctaacaaattcagtttctggctg
acaactatagatactcagtctcagttctctgatccacaaccgcaaactctcaaagctggc
aatttacgaagccgggtcagccgatgcgcagtctgtcagaggaatccatag
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integrated database retrieval system
