Lingula anatina: 106178021
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Entry
106178021 CDS
T04921
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
lak
Lingula anatina
Pathway
lak03020
RNA polymerase
lak03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106178021
09124 Replication and repair
03420 Nucleotide excision repair
106178021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lak03021
]
106178021
03019 Messenger RNA biogenesis [BR:
lak03019
]
106178021
03400 DNA repair and recombination proteins [BR:
lak03400
]
106178021
Transcription machinery [BR:
lak03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
106178021
Messenger RNA biogenesis [BR:
lak03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106178021
DNA repair and recombination proteins [BR:
lak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106178021
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
RNA_pol_Rbc25
Motif
Other DBs
NCBI-GeneID:
106178021
NCBI-ProteinID:
XP_013416467
UniProt:
A0A1S3K1R4
LinkDB
All DBs
Position
Unknown
AA seq
172 aa
AA seq
DB search
MFYHVSLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCSGKYGFIIAVTTIDNIGAGLIQ
PSRGFVLYPIKYKAIVFRPFKGEVVDAVVTQVNKVGLFVEIGPLSCFISRHCIPGDMEFD
PNSNPPCYKNKDEDMVIQQDDEIRVKVIGTRVDATDIFAIASLMDDYLGLVS
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgttttaccacgtttccttagaacatgaaattttgctccacccaaggtactttggtcca
aatcttctaaacactgtcaaacaaaagctcttcacagaagtggaaggtacttgcagtggg
aagtatgggtttatcatagcagttaccacaatagacaatattggagcaggactcattcag
cccagcagaggatttgtactgtacccaataaagtacaaggcaattgtattcagaccattt
aaaggggaagttgttgatgccgtggtcactcaagtcaataaggttggattatttgttgaa
attggtcctctttcatgtttcatttcaagacattgcattccaggagatatggaatttgat
cccaactcgaatccaccttgctacaaaaataaagatgaggatatggtaatacaacaagat
gatgaaattcgagtgaaggtgattggtacaagggtagatgcaacagacatttttgccata
gcctctctaatggatgattatttaggattggtaagctga
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integrated database retrieval system
