Lingula anatina: 106178168
Help
Entry
106178168 CDS
T04921
Name
(RefSeq) cleavage stimulation factor subunit 3 isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
lak
Lingula anatina
Pathway
lak03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106178168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lak03019
]
106178168
Messenger RNA biogenesis [BR:
lak03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
106178168
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
PRP6_TPR
TPR_6
TPR_19
Motif
Other DBs
NCBI-GeneID:
106178168
NCBI-ProteinID:
XP_013416685
UniProt:
A0A1S3K227
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
MSQRSARESGYIPDKIKKAEMRIEEDQFDMEAWSVLIRDAQHKKIEDARQLFERLVAQFP
NAGRYWKLYIEQEMKFRNYEKVEKLFQRCLIKILNIDLWKTYLNYIKEAKGSLPSYREKM
AQAYDFALDKIGMDIMSYQVWADYISFLKSVEAVGSYAENQRIAAVRKVYQRGCVNPMVN
IEQLWKDYCAYENSINPLIAKKMTEDRGRDYMNARRVAKEYELVTKGLNRNAVSVPPQNT
PDEAKQVEHWKKYIHWEMSNPLRTEDQALIAKRVMFAYEQCLLCLGYHPDVWYEAASYLS
ETSKILTEKGDQNAGKLFADEAASVYERAITSLLKSNMLLHFSYADFEEGRMRHEKVHSI
YKKLIVIPDIDPTLVYVQYMRFARRAEGIKTARTVFKMAREDSRTTYHVYVAAALMEYYC
SKDKNVTYKIFELGLKKYGHIPEYCLAYIDYMSHLNEDNNTRVLIEKVLSGPLSPENSME
VWWKFLEFESNVGDLASVLKVEKRRAVVLEKLKEFEGKETAQLIDRYKYMDLFPCSQNEL
RALGYQSLVKQSVLHVPLQLGNEPQTLLATEEEEAVKRPEYPKPDTSQMIPFKPKAIVPT
GAHPVEGGVFPPPPAAAQLLTMIPPPDCFTGPFVLMDKFIEHMKDLKLPDAPPQSPMVNG
DMDSGTALSAEMASGRKRKAAGGDDSDDEDSNLVPPVHDIYRARQQKKVK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcggtctgcaagggaatctggatatattccagataagattaaaaaagctgaa
atgcggatagaggaagatcagtttgatatggaagcgtggagtgttcttataagagatgct
cagcacaaaaagatagaagatgctcggcagctgtttgaaagacttgtcgctcagtttcct
aatgcaggccgttattggaagctctacatagaacaagagatgaaatttagaaactatgaa
aaagtagaaaagttattccaaagatgtcttatcaagattttaaacattgacttatggaaa
acgtatcttaattatataaaagaagcgaaaggaagtcttccctcctacagagaaaagatg
gcacaggcatacgactttgctctggataagattggcatggacataatgtcgtaccaggtc
tgggcagactacatcagtttcctcaaatctgtggaagcagtaggatcatatgcagaaaac
caaaggatagctgcagtcaggaaagtttaccaaagaggttgtgttaaccccatggtcaat
atagaacaactgtggaaagattattgtgcttatgaaaatagtatcaatcctctaatagcc
aagaagatgacagaagacagagggagagattatatgaatgctcgcagggttgcaaaagag
tatgagctggtgacaaaaggattgaataggaatgctgtatcagtgccacctcagaatact
ccagatgaagctaaacaggttgaacactggaaaaagtacatacactgggaaatgagcaat
ccactaaggactgaagaccaggctctgattgctaaaagagtgatgtttgcctatgagcag
tgtttactgtgcctgggctatcaccctgatgtttggtatgaagctgcttcctacctgtct
gaaaccagcaaaatattgacagagaaaggggatcagaatgctgggaagctgtttgctgat
gaggcagcatcggtgtatgagagggcaatcacatcacttctgaagtccaatatgcttctc
cacttttcctatgcagattttgaagagggaaggatgcgacatgaaaaggttcatagcatt
tacaagaaactcatagtgattccagatatagacccaactttggtttatgtccagtacatg
aggtttgcacgaagggctgagggtatcaagacagcacgcacagtattcaagatggcacga
gaagattctagaacaacatatcacgtgtatgttgcagctgctttaatggaatattactgc
agtaaggacaaaaatgttacatacaaaatattcgagttaggcttaaaaaagtatggtcat
atacccgaatactgtttagcatacatagactatatgtcacatttaaatgaggataacaac
acaagggtgctgatagagaaggttttgtctggtcctctgtcccccgagaactctatggaa
gtttggtggaagtttctagaatttgagtcaaatgttggagacttggcaagtgttctcaag
gttgagaaaaggagagcagtagtattagagaagcttaaagaatttgaaggcaaagagaca
gctcaactaatagacagatacaaatacatggaccttttcccctgttctcaaaatgagttg
agagctttgggatatcagagtctagtaaaacagagtgtcctccatgtgccactgcagctg
ggaaatgaacctcaaacattactagcaactgaggaagaagaggcagtaaaaagaccagaa
tatccaaaaccagacacatctcaaatgataccatttaaacccaaagccatagttcctacc
ggtgcacaccctgtagagggaggggttttccccccacccccagctgccgcacagttactc
acaatgatcccaccaccagattgtttcacgggtccttttgttctcatggacaaattcata
gaacacatgaaggacttaaagctccctgatgccccgccccagtcacccatggtaaatgga
gacatggactcaggcaccgctctgtcagctgaaatggcgtctggtaggaaacgcaaggca
gcaggaggggatgacagcgatgacgaggacagtaatctggtaccaccagttcatgatatc
tatagagctagacaacagaagaaagtgaaatga
DBGET
integrated database retrieval system
