Lingula anatina: 106178496
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Entry
106178496 CDS
T04921
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
lak
Lingula anatina
Pathway
lak03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106178496
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lak01002
]
106178496
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lak03021
]
106178496
03036 Chromosome and associated proteins [BR:
lak03036
]
106178496
Peptidases and inhibitors [BR:
lak01002
]
Metallo peptidases
Family M1
106178496
Transcription machinery [BR:
lak03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106178496
Coactivators
SAGA/TFTC/STAGA complex
106178496
Chromosome and associated proteins [BR:
lak03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
106178496
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Peptidase_M1_N
FBA_2
DUF5715
TriTu
Motif
Other DBs
NCBI-GeneID:
106178496
NCBI-ProteinID:
XP_013417160
UniProt:
A0A1S3K3G1
LinkDB
All DBs
Position
Unknown
AA seq
1290 aa
AA seq
DB search
MKKEGKRADTQRPYKLAHQVLCITGFNFRLQSLIGYVELVIYPLRQDLRRIKINCKQGRI
YRVCFQDQWEAPFLYNDPTLEICQGDVKQRNLDFFESCHASATAAVDPDCANGEVTIRVP
FEAFPLVSELKPLRVSIEFSLETPLGGIKFVVPETDSNQSMADRGAHLFTYGCEDSSRLW
FPCIDSYSEPCTWKLEFTVDVNMTAVSCGDLVETVYTPDMKKKTFHYFLSTPTAAPNIAL
AVGPFEILMDPNMHEVTHFCLPHLMPILKHSTAYLHEAFEFYEELMSIRYPYSCYKQVFV
DQAYAEASPYATLTIFSTNLLHSARIIDQTPVSRTLMAGAIAQQFFGCFIAMESWYDEWL
PKGIAGYLTSLYIKKAFGNNEYRHYIAKELKCVQEYEQQVAGIVLDPSAQENSTAKLYFP
VNHPHTVSPRYQAMFERKAMLVIRMLEIRIGRELLLQTLNKLLSLAIQASQQKFQPNFNI
WGNMLLSMTSFLKIKSTVTGKDINVFLDQWVRQSGCARFFGNFVFNRKRNVVELELKQDM
NAKGAMKYVGPLTMTIQELDGSFNHTFKIEENKTKFEITCHSKSRRNKKKKIPLMTGEEV
DMDLSAMDADSPVLWLRVDADMTILRQVTWEQPDFMWQYQLRYERDVVAQLEAIEALEKF
PTPATRMSLTDTIENEQCFYRVRMEAAMCLARVANAMVANWAGPPAMMTIFRKMFGSHTC
PSIVKQNNFSNFQHYYLQKTIPVAMSNLRNVHNICPPDVIRFLLDLFKYNDNRKNKYSDN
YYRATLVDAIANTVTPAVTTFTGPGLGPTASSLTPDMKLVLEEITRFINLEKLLPCYRYT
VTVSCLRAIRKLQRMGHIPSDAALFRSYSQFGNFVDVRLAAFEALVDYTKVEADPDELNN
LLDTVEDDLDPYIKHGVLKLLLTNPPFTKQDNKSSMGTEMLVERLWRMMNSGTSNDARLR
CGIADLYFTFYGRTRPSCLPIPESVIVLNLKEKRTMVHPSLSLSEIGQEEETIHEEEDSI
LWTPIKTDFDAPSFPASSSSSTVESKKRKADSPLIFDDIKKESSAEPNIKAEVEENPCKL
KIRIGKIEEADDFLSPVSQSALSSRSISPVPKTPTSSTTGLAAELMTFASPSPEAVLPET
SPTTKPNISVLAPPSMGSNDSPIGLSEDSNSQPPFETKIDVTESSAPLEEKPSSGAAPQE
VPQESTEADPHKAHKAKKKKKKNKHKHKHKHKHEKGEKGERPVDKADKSVDRKDKTSEDV
LQKSDSAHHLDMYSRSPDLDEPSSPEFEVM
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggaaggcaagcgagcagatacacagaggccgtataaactggctcatcaagtt
ctctgtataacaggatttaatttccggctgcagtcgcttattggttatgttgaattggtc
atctatcctctgaggcaagatcttagaagaatcaagataaattgcaaacaaggaaggata
tacagagtatgttttcaagaccagtgggaagccccattcctgtacaatgatcctacactg
gaaatctgccagggggatgtcaaacagagaaacttagacttttttgagagttgccatgcc
tcggctactgcagcagtggatccggactgtgccaatggagaggttacaatcagggtgcct
tttgaggcattcccactggtatcagaattgaagccattgcgagtcagtatagagttttcc
ttggagacccccctaggtggcatcaagtttgtagtccctgagacagacagcaatcagtct
atggcagatagaggggcacatttgttcacatatggctgtgaggactcctcaaggttatgg
ttcccatgcatcgacagctactctgagccatgtacctggaagctggagttcactgtggat
gtcaacatgactgcagtatcatgtggggatctggtggaaactgtatacacaccagacatg
aagaagaaaacattccattatttcctctccacacctactgcagcaccaaatattgctctg
gctgtaggaccatttgaaattctgatggaccccaacatgcatgaagtgacccacttctgt
ctgccacatcttatgccaattctcaaacattctacagcttatctacatgaggcatttgaa
ttctatgaagaactgatgtcaatcaggtacccatactcgtgctacaagcaggtgtttgtg
gaccaggcctatgctgaggcttctccctatgctactttgacaatattcagcaccaacctc
ctccactcagccagaatcattgaccagactccagtgtctagaacactcatggcaggcgcc
attgctcagcagttttttggctgttttatagccatggaatcttggtatgatgagtggtta
ccaaaaggaatagctggctacttgacaagtctttacatcaagaaagcatttggaaacaat
gagtacaggcattacatagcaaaggagctgaagtgtgttcaggagtatgagcagcaggtg
gcagggattgtcttggatccttcagctcaggaaaacagcacagctaagttatatttccct
gtgaaccacccccacacagtgtccccgcggtaccaggcaatgtttgagaggaaagccatg
ctggttatacgcatgctggaaattagaataggaagagaactgctcttacagactctgaac
aagttgctgtcattggccattcaagcctctcaacaaaagtttcaacccaattttaacatc
tggggaaatatgttactttcaatgacttctttcttgaaaatcaagtctacagttactgga
aaagatatcaatgtctttttggatcagtgggtacgtcagagtggctgtgcaagattcttt
ggcaattttgtatttaatcgtaaaagaaatgttgttgagttagagctgaaacaggatatg
aatgcaaagggggctatgaagtatgtgggcccactgaccatgactatacaggagttggat
ggatcctttaaccacacattcaaaatagaggaaaacaaaactaagtttgagataacttgc
cattcaaagagcaggaggaacaagaaaaagaagattcctctcatgactggggaagaggtt
gacatggaccttagtgcaatggatgctgactcccctgtgttatggttgagggtggatgca
gacatgacaatcctgaggcaggtgacctgggagcagccagacttcatgtggcaataccag
ctcagatatgaaagagatgtggtagcacagcttgaggcaattgaagcacttgaaaaattt
cctactcctgccactagaatgtccctgacggataccattgaaaatgaacagtgtttctac
agagtgcgaatggaggctgctatgtgcctggcaagggttgctaatgccatggtggccaac
tgggcggggcctccagccatgatgaccatattcaggaagatgtttggctcccacacctgc
ccatccatagttaaacaaaataacttttccaattttcaacattattacctacagaagacc
atcccagttgccatgtccaacctgagaaatgtgcacaatatttgtccccctgatgtcatc
agatttcttctggacttgtttaaatataatgacaacaggaaaaacaagtattctgataat
tactaccgagccactcttgtggatgccatagccaatacagtaactccagcagtgaccact
tttactggacctgggttagggcccactgcatcttctctcactcctgacatgaagcttgta
ttggaggaaatcacaagatttatcaacttagaaaagctgctgccctgctacagatacaca
gttactgtgagctgtctccgagccatccgtaagctccagagaatgggccacatacccagt
gatgcggcactgttcagaagttattcacagtttgggaattttgttgatgttcgcctagct
gcttttgaagctttagtggattacactaaagttgaagctgatccagatgaactgaataac
cttttagatacagttgaagacgaccttgatccatacatcaagcatggtgtgttgaagctg
ctgctgaccaaccctccattcactaagcaggacaacaagagcagtatgggaactgagatg
ctggtggaacgcctatggagaatgatgaactccgggacatccaatgacgccagactgcga
tgtggtatagctgacctgtatttcactttttatggtcgcacaaggccatcatgtttgcca
attccagagtccgtaatagtgctaaatttgaaggaaaaaagaaccatggtccatccgtct
ttatctttgtcagagataggccaagaagaggagaccattcatgaagaagaagacagcata
ttatggactccaataaaaacagactttgacgcaccatctttccctgctagtagtagtagc
agcacagtagaaagtaaaaaacgaaaagctgattctcccttgatatttgatgacatcaag
aaagagtcgagtgcagagcctaacatcaaggcagaagtggaggaaaatccttgtaaactg
aagataaggattggaaaaatagaggaagcagatgattttctctctcctgtctcacaatct
gccctgtcctctcgcagtatatcacctgtcccaaagaccccaaccagttcaaccactggt
cttgctgcagagttaatgacatttgccagtcccagtcctgaagcagtcttaccagagaca
tctcccaccaccaaaccaaatattagtgttcttgcacctccctccatgggtagcaatgac
agccctatagggctcagtgaagattccaactcacagcccccatttgagacaaaaattgat
gtaacagagtcatctgctcctctggaagagaaacctagttctggtgctgctccacaagaa
gttccccaagaatcaacagaagcagatcctcacaaagcacataaagcaaagaagaagaag
aagaaaaacaaacacaagcacaaacataaacataagcatgagaaaggagaaaagggagaa
agacctgttgacaaggcagacaagtctgtagataggaaagataaaacatctgaagatgtt
cttcagaaatcagattcagctcatcacttagacatgtactcgaggtctccagatctggat
gagccaagttcacctgaatttgaagtaatgtga
DBGET
integrated database retrieval system
