KEGG   Lingula anatina: 106179471
Entry
106179471         CDS       T04921                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
lak  Lingula anatina
Pathway
lak03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lak00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106179471
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lak03041]
    106179471
Spliceosome [BR:lak03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    106179471
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st PRP4 ANAPC4_WD40 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_DCAF4 Beta-prop_Aladin Beta-prop_EML WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_SPT8 WD40_like WD_LRWD1 Beta-prop_HPS5 LUC7 Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 106179471
NCBI-ProteinID: XP_013418559
UniProt: A0A1S3K7Z1
LinkDB
Position
Unknown
AA seq 505 aa
MSDEEDNVTYVRPKKTINYGSLEQQEKLRLLSGSSGEAIQSAIAAGNINISEETMEIEEA
DGPDSNAAVLAFFEKRKRARQIQVSTDDLEVKANLRQLGEPICLFGEGPADRRERLRALL
ADIGTDAIKKEVEAEKAQDKPDDVTWYHEGTETLQDARMWIAKYSLPRARERLRKAREEK
NTPEAKRQARTQELHKKLRSLTNEYSQIGDNRPISFCQFSPNSKMLVTASWSGLCKLWSI
PDCSAIRTLRGHNCNVGAIVFHPEATVNLDNRACCMASCAQDGTVKLWNLESEEPVADIE
GHAPYRVSRLAYHPSGRFLATCCFDNSWRLWDLEAQEEILHQEGHSKPVYDIAFQGDGSL
AATGGLDGFGRVWDLRTGRCIMFMEGHLKSVLGIDINPNGYHIATGSEDNTCKIWDIRQR
CLVYTIPSHTNLVSKVKFQPGNGRYLVTASYDNTAKVWSHPSWSPLKTLAAHESKVMCID
ISPNMEYIATASYDRTFKVWAPDIL
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgtctgatgaagaggataatgttacttatgtgcggccaaagaagacaataaactatgga
agtctggagcagcaagaaaagcttcggctgctgtcaggaagcagtggggaggctatccag
tcggccattgcagctggcaatattaatatatcagaagaaacaatggaaatagaagaagct
gatggcccagattctaatgcagctgtacttgccttttttgaaaaacgtaaaagggctcga
caaatccaagtatccacagatgatttagaagtcaaggctaacctacggcaactgggagag
ccaatatgtttatttggggagggacctgctgatagaagggaaagactgagagccctgctg
gcagacattgggacagatgccatcaagaaggaagttgaggctgaaaaggcacaggacaaa
cctgatgatgtgacatggtatcacgaggggacagaaacactacaggatgccagaatgtgg
atagctaaatattccttgccaagagcacgagagcgactgcgtaaggccagagaagagaaa
aatactccagaagccaagaggcaagccagaacacaagaattacacaagaagctaagatct
ttaactaacgagtacagtcagataggagataacagaccaatctcattttgtcagttcagc
ccaaactcgaagatgttggttactgcatcatggagtggactctgcaagttgtggtctatt
cctgactgtagtgctatcagaacactccgaggtcacaactgtaatgttggagcaatagta
ttccacccagaggccacagttaaccttgacaacagggcgtgctgcatggcctcctgtgca
caggatgggacagtcaagctctggaatttagaaagtgaggagcctgtggcagacatagaa
ggacatgcaccataccgcgtgagcagactggcgtaccatccgtcagggaggttccttgcc
acatgctgttttgataattcctggaggctctgggatcttgaggcacaggaggagatttta
caccaagaaggtcatagtaaaccagtgtatgacatagcattccagggagatggatcctta
gcagcaacgggtggtttggatggctttggtcgtgtgtgggacctaaggactgggcgctgt
atcatgtttatggaaggacatctcaagtcggttctaggaattgacatcaatcctaatggc
taccatattgccacgggaagtgaagacaacacctgtaaaatttgggacatcagacagagg
tgtctcgtctacaccatcccctcacacacaaacctcgtctccaaggtcaaattccaacct
ggcaatggaagatatttggtcactgcctcatacgacaatacagcaaaggtgtggtctcat
ccgtcctggtcgcctctgaagactctggcagcacatgaaagtaaagtgatgtgtatagat
atatctcctaacatggagtacatagccactgcatcctatgacaggacatttaaagtatgg
gcaccagatattctgtag

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