Lingula anatina: 106179781
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Entry
106179781 CDS
T04921
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
lak
Lingula anatina
Pathway
lak03030
DNA replication
lak03410
Base excision repair
lak03420
Nucleotide excision repair
lak03430
Mismatch repair
lak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106179781
03410 Base excision repair
106179781
03420 Nucleotide excision repair
106179781
03430 Mismatch repair
106179781
03440 Homologous recombination
106179781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lak03032
]
106179781
03400 DNA repair and recombination proteins [BR:
lak03400
]
106179781
Enzymes [BR:
lak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
106179781
DNA replication proteins [BR:
lak03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
106179781
DNA repair and recombination proteins [BR:
lak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
106179781
MMR (mismatch excision repair)
DNA polymerase delta complex
106179781
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_exo2
divDNApol
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
106179781
NCBI-ProteinID:
XP_013418997
UniProt:
A0A1S3K9S8
LinkDB
All DBs
Position
Unknown
AA seq
1095 aa
AA seq
DB search
MDKRKNQPWKGGPPSKKNKQDDDGDDPSTFESELAMLEDMENDMMQESESQEILGEGPEY
MTTSVKWSRPPLPSIDPKKDTIIFQQLDLDHYTGTHFPGMPGSTKGPVPIVRMYGITMEG
NSVMAHIHGFAPYFFVPAPDGFKISHAEDFRQALNEAVVKDMRSNKDNVVDAVLAVELAT
KENIYGFHTNGKRDFLKITVALQRLIAPAKRILEMGFSFRGFPNHGYSTFESNIDFEIRF
MVDTKVVGCNWIEVPARKYSVRKSGDAIKPTSRCQLELDVSWENFISHAPEGEWSKVAPF
RILSYDIECAGRKGIFPEPDKDPVIQIANMVIKQGSKDPFIRNVFTLDTCGHIVGSQVLS
YQTEEEMLKKWSDFIREVDPDLITGYNIQNFDMPYLMNRARHLKVKDFHYLSRIKDKEST
VKEAMFQSKQMGKRENKVVNTEGRIQFDLLQILLRDYKLRSYTLNAVSYHFLQEQKEDVQ
HSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLEKLMCVINYMEMARVTGVPLTYLLTRG
QQIKVISQLLRKAKDTAYVIPAMKPETGDEYAGATVIEPNKGYYDVPIATLDFSSLYPSI
MMAHNLCYTTLLRNQQVIQREGLTAEQYIKTPSGNFFVKQSVRKGLLPEILDDLLSARKR
AKNDLKKETDPFKKKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTGFGRMMIE
QTKNYVEEHYTVENGYPANAKVIYGDTDSVMCKFGVKTVAEAMKLGQEAADLISEKFIKP
IKLEFEKVYFPYLLINKKRYAGLYFTRPEIHDKMDCKGIETVRRDNCQLASHLISTCLQM
LLIERNPNGAVEHAKQVISDLLCNRIDISQLVITKELAKTDSEYSAKQAHVELANRMKKR
DAGSAPNLGDRVPYVIIAAAKGTPAYMKSEDPIYVLENNIPIDTQYYLDNQLSKPLLRIF
EPILGEKKAESVLLRGDHTRTKTMIMSKVGGLSAFTKKRSTCIGCKAVLEKEGIAVCKHC
KSRESEIYQKEISMANALEEKFARLWTQCQRCQGSLHEDVLCTSCDCPIFYMRKKVQKDL
ATQDKLLQRFGPPTW
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggacaaacggaagaatcaaccctggaagggtggtcccccttctaagaaaaacaagcaa
gatgatgatggagatgatccatcaacctttgaaagtgagttggccatgctggaggatatg
gagaatgatatgatgcaagagtcagaatcacaagaaatattgggagagggcccagaatat
atgacaacatctgtgaaatggtcccgtccacctctgccttctatagaccccaagaaagat
acaataatcttccaacagttggatttagatcattacacaggcacccattttcctggaatg
ccaggttctacaaaaggcccagtgcccatagtcaggatgtatggcatcactatggaaggg
aacagtgttatggctcacatccatggttttgctccatacttttttgttcctgcaccagat
ggatttaaaatctcacatgctgaagacttcaggcaagcgttaaatgaggctgtggttaaa
gatatgcgctccaacaaggacaacgtggtagacgctgtgctagcagtagagctagccaca
aaagaaaatatatatggattccacacaaatgggaagagagatttcctgaaaattaccgtg
gccttgcagagactaattgctccagccaaaagaattcttgagatgggattctcttttcgt
ggctttccaaatcatgggtattctacttttgaaagcaacattgattttgagatcaggttc
atggtagacaccaaagtagtgggatgcaactggatagaagtcccagcaagaaagtactct
gtgcgcaagagtggtgatgccataaaacccacctctcgctgccagctggaactggacgta
tcctgggaaaactttatttcacatgccccagagggagaatggtccaaagtggcacccttt
agaattctcagttatgatattgaatgtgctggcaggaaaggcatcttcccggaacctgac
aaggaccctgtaattcagatagctaacatggtcatcaaacaagggagtaaggaccccttc
atcaggaacgtgttcactctcgatacctgtggccatattgtgggctcacaggtgctgtca
tatcaaacagaggaagagatgttgaagaaatggtcagacttcatcagagaagtggaccct
gacttaataacaggctacaatatccagaacttcgatatgccgtatctgatgaaccgtgcc
agacatctcaaggtgaaagacttccattacctgagccgtatcaaggacaaggagtccact
gtgaaggaggcaatgttccagtccaagcagatgggaaagagagagaataaagtagtgaac
actgaaggaaggatacagtttgatttgctgcagattttgctgagggactacaagttgaga
tcttacaccctgaatgcagtctcttatcactttctacaagaacaaaaggaggatgttcag
cattcaatcattacagatttgcagaatggcaatgagcagacgagacgaaggttggctgtg
tactgcttgaaggatgcatatcttccactgcgactcctggaaaaactgatgtgtgttatc
aattacatggagatggccagggtcactggggtgccgctgacatatctgctcaccagaggg
cagcaaattaaagtcatttcgcagttgttgagaaaggccaaagatacagcctatgttatt
cctgccatgaaaccagagacgggagatgaatatgcaggagcaacagtcattgaacctaat
aaaggatactatgatgttcctatagctaccctggatttttcctccctgtacccctccatc
atgatggcccacaacctgtgctacaccactctgctgaggaatcaacaggttatacagaga
gagggactgactgcagagcagtatattaaaacaccatcagggaatttctttgtaaagcag
tcagtaagaaagggtctgcttccagagattcttgatgacctgctgagtgcaagaaaaaga
gccaagaatgacttgaaaaaagaaacagacccttttaagaaaaaagtgcttgatgggcga
cagcttgctttaaagatcagtgccaactctgtgtatggcttcactggggcacaagttggg
aagctgccctgcttggaaatatctcagagtgtgactggttttggacggatgatgattgaa
caaacaaagaactatgtggaggagcactatactgttgaaaatggctaccctgcaaatgct
aaggttatttatggagatacagattctgtgatgtgcaagtttggagtcaagactgttgca
gaagcaatgaagcttgggcaagaggcagctgatttaatatctgaaaagtttatcaaacct
attaaactggaatttgaaaaggtttatttcccttatcttcttatcaacaagaagaggtat
gcagggctttactttacccgacctgaaattcacgacaagatggattgtaagggaattgaa
acagtaaggagggacaactgtcaactggcatcacaccttatcagcacctgtcttcagatg
ttattaattgagaggaatcccaatggtgctgtagaacatgccaaacaggtgatatctgat
ctcctgtgtaacagaattgacatctcccaactggttatcacaaaggaacttgccaagaca
gacagtgaatattctgccaagcaggcacatgtggaattagctaatagaatgaaaaaaaga
gatgcaggcagtgctcctaacctgggggacagagttccatatgttataattgctgctgcc
aagggaactccagcatatatgaaatctgaggatccaatctatgtgctagagaacaacata
ccaattgatacacaatattatctggacaatcagttgtctaaaccactgctcaggatattt
gagcctatccttggcgaaaagaaggcagaatctgttctcctaaggggagatcacacaaga
acaaagactatgataatgtccaaagttggaggattgtctgcatttaccaagaagagaagc
acatgcataggatgcaaagctgttttggaaaaagaaggaattgcagtttgtaaacattgc
aaaagtagggaatctgaaatttaccagaaggaaatttcaatggccaatgctcttgaggag
aaatttgcacgtctctggacacaatgccaaagatgtcaaggcagtctgcatgaggatgtc
ctgtgtacaagttgtgactgtcccatattttacatgaggaaaaaagttcaaaaagatttg
gcaacccaggacaagttgcttcagagatttggccccccaacctggtga
DBGET
integrated database retrieval system
