Lingula anatina: 106179977
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Entry
106179977 CDS
T04921
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
lak
Lingula anatina
Pathway
lak03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106179977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lak03041
]
106179977
03009 Ribosome biogenesis [BR:
lak03009
]
106179977
Enzymes [BR:
lak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106179977
Spliceosome [BR:
lak03041
]
Complex A
U2 snRNP components
U2 related factors
106179977
Complex B
106179977
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
106179977
Ribosome biogenesis [BR:
lak03009
]
Eukaryotic type
90S particles
Helicases
106179977
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
DEAD
Helicase_C
AAA_19
AAA_22
nSTAND3
SRP54
Flavi_DEAD
ABC_tran
AAA_7
AAA_29
NACHT
AAA_23
Motif
Other DBs
NCBI-GeneID:
106179977
NCBI-ProteinID:
XP_013419261
UniProt:
A0A1S3KAH2
LinkDB
All DBs
Position
Unknown
AA seq
755 aa
AA seq
DB search
MSKRHRIDVGDYASKRGRDDDYRKDRDRDRDRDRGKDEKSSSAASTTVPAAASVSTPNMM
PGVGVNMNLNPFTGLPHTPKYYELLRKRVTLPVWEYKSSFLESLTNNQTTVLVGETGSGK
TTQIPQWCLEWVRVKHQGKKGVACTQPRRVAAMSVAQRVSEEMDVGLGQQVGYSIRFEDC
TSSNTLLKYMTDGMLLREAMSDPLLEGYGVIILDEAHERTLATDILMGLLKEVAKQRADL
KVLIMSATLDAGKFQDYFNHAPLMSVPGRTFPVEIFYTPEPERDYLEAAIRTVIQIHMCE
EKEGDILLFLTGQEEIEEACKRIAREVENLGPDVGEMKCIPLYSTLPPNLQQRIFEPAPP
KRPNGAIGRKCVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASA
QQRAGRAGRTKPGKCFRLYTEKAYKSEMQENTYPEILRSNLGSVVLQLKKLGIDDLVHFD
FMDPPAPETLMRALELLNYLAAIDDDGELTELGSMMAEFPLDPQLAKMVIASCDFTCSNE
ILSITAMLSVPQCFVRPTEVRKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHEDPQWCYD
NFINYRSLKSADNVRQQLARIMDRFSLKRTSTDFTSRDYYVNIRKALVSGFFMQVAHLER
TGHYLSCKDNQVVQLHPSTCLDHKPEWVLYNEFVLTTKNYIRTVTDVKPDWLIQIAPQYY
EMSNFPQCEAKRQLERIIMRLESKQFNQGYNQGYN
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcggcatcgaatcgacgttggtgattatgcgtcgaaaaggggaagggatgat
gattacagaaaagacagagaccgagatcgtgacagagaccgtggtaaagatgaaaaatca
tcctcagcagcctcaacaacagtgcctgcagcagccagtgttagtacccctaatatgatg
ccaggagttggtgttaatatgaaccttaaccctttcacaggtttaccacacacacctaaa
tattatgagctccttagaaaaagagtaactttgccagtgtgggagtacaagagtagtttc
ctagaatcacttaccaacaatcagaccacagtgttggtaggtgaaacaggatctggaaaa
actacacagattccccagtggtgtttggagtgggtcagggtgaagcaccagggtaagaag
ggtgtggcctgcacacagccaaggagggtggcagccatgtcagtagcccagagagtgtca
gaagaaatggatgttggtctgggacagcaagtgggttatagcatccgttttgaggactgc
acatcatcaaacacattgttgaaatacatgactgatggtatgttgctacgagaagccatg
tcagaccctttattagaaggctatggtgttattatacttgatgaagctcatgaacgtaca
ttggccacagacatcctaatgggtctgctgaaggaggtagccaagcagagggcagactta
aaagtcctgatcatgagtgctacactggatgctggaaaatttcaggattatttcaaccat
gcaccccttatgagtgtcccaggaaggacattccctgtagagattttttacacacctgag
ccagaaagagactacttggaggctgcaatacgtacagtcatacagattcacatgtgtgaa
gagaaagagggagatatcctgttgttcttaactggtcaggaggaaattgaagaagcctgt
aagagaattgctcgagaggtggaaaacttgggcccagacgttggcgagatgaagtgcatt
ccgctttactcaacacttcctcccaacctgcagcagaggatctttgaacctgctcccccc
aagagacccaatggtgcaattggcaggaaatgtgtggtttcaaccaacattgctgagaca
tcccttactattgatggggttgtgtttgtgattgacccaggatttgcaaaacaaaaggtg
tataatcccagaatccgtgtggagtccctgttagtgacagccatcagtaaggcaagtgca
cagcagagggctgggcgtgcaggaaggacaaagcctggaaaatgttttaggttgtacaca
gaaaaagcatacaagtcagaaatgcaggagaacacttaccctgagatccttcgttccaac
ttgggatctgtggtgttacagctcaagaaactgggaattgatgacttggtgcactttgat
tttatggaccctccagctccagagactttgatgagagcacttgagctgctgaactacctt
gctgccatagatgatgatggggagctgacagaattaggatccatgatggcagagtttcct
ctggaccctcagttggcaaagatggtgattgccagctgtgacttcacctgctccaatgaa
attttgtccatcactgccatgttatcagtcccacagtgtttcgtccgccctacggaggtg
aggaaggctgcagatgaggccaagatgcgctttgcccacatagatggtgatcatctgact
ctgctcaatgtgtaccatgccttcaagcaaaatcatgaggatccacagtggtgttatgac
aacttcatcaactaccgctcactgaagagtgctgacaatgtgcgtcagcagctggctagg
atcatggaccgtttcagcctcaaacgaaccagtactgattttaccagcagggactactat
gtcaatattaggaaagcacttgtgtctggcttctttatgcaggttgcccaccttgaaaga
actggtcactatttgagctgcaaggacaaccaggttgtccagcttcacccatctacctgc
cttgatcacaagcctgaatgggtgctatacaatgagtttgtactgaccacaaagaactac
atcagaacagtcacagatgtcaaacctgattggttgattcagattgcaccccagtactac
gaaatgagcaacttcccccaatgtgaagccaagagacaactagaacgtattatcatgcgt
ctggagtctaagcagttcaaccaaggatataatcaaggatacaactga
DBGET
integrated database retrieval system
