Lingula anatina: 106179989
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Entry
106179989 CDS
T04921
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
lak
Lingula anatina
Pathway
lak03030
DNA replication
lak03420
Nucleotide excision repair
lak03430
Mismatch repair
lak03440
Homologous recombination
lak03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106179989
03420 Nucleotide excision repair
106179989
03430 Mismatch repair
106179989
03440 Homologous recombination
106179989
03460 Fanconi anemia pathway
106179989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lak03000
]
106179989
03032 DNA replication proteins [BR:
lak03032
]
106179989
03400 DNA repair and recombination proteins [BR:
lak03400
]
106179989
Transcription factors [BR:
lak03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106179989
DNA replication proteins [BR:
lak03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
106179989
DNA repair and recombination proteins [BR:
lak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
106179989
MMR (mismatch excision repair)
106179989
DSBR (double strand breaks repair)
HR (homologous recombination)
106179989
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
OB_MEIOB_N
AbiJ_NTD4
Motif
Other DBs
NCBI-GeneID:
106179989
NCBI-ProteinID:
XP_013419279
UniProt:
A0A1S3KA01
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MSVSMLTAGAIRDIVTGKTVEQPVLQVLGHKKIAGSGGSATERFRLLLSDGVNSQSSAML
GTQLNYLVLNGELEDNSIVRLDKFICNTIPPDRRVMILLELSIIKRGSEVPGKLGNPVPF
KGTAAAGGDANRNPPQQTNEHAASNGAPAHKPQQPQKPAQQNPYNREQAQQSTGQTNSFY
GKNNVTPKAYGNNNLPQTPGGSTPKVYPITALTPYQNRWTIRARLTNKSNIRTWSNSRGE
GKLFSMTFTDESGEIRATAFKAEVDKFYDILEVNKVYYVTKATLKTANKQYSSVDNDYEM
TLNRDSQIEECTEDVDLPTVTFNFTPINALGNMAPNTTVDVIGVVKSVADVSTIIAKATQ
KELKKREVSLVDQNQVMINLTLWGETAEGFDGSNHPVLAIKGARLSDFGGRSLSTLSSSQ
LIVNPDIEEAHRLKGWYDRDGHNLDFQQYRNEGGQGGSGGATNWKSFAAVKQENIGATEK
PDYYSAKGTVIFMRKENCMYQACPKMDCNKKVVDQSNGLYRCEKCQLEYPNYKWRMILSA
NLADYSDNQWVTCFQETTETLLGKSADELGSLRESDEASFDQIFQEATFKSYTFKLRAKQ
ETYNDESRLKTIVVNATPIDYREYNRKLIQDIEKMAGMI
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcagtatgcttacagccggggctataagggacattgtcacaggaaagacggtt
gaacaaccagttctacaggttttgggtcacaagaagattgcaggaagtggtggatctgct
actgagcgttttcgtcttctattgtctgatggtgtaaacagccaatcctccgctatgctg
ggcactcagttgaattatcttgtccttaatggtgagctggaagataattctattgtcaga
ctggacaaattcatctgtaatactatccctccggacaggagagtcatgatcctgttagaa
ctgtccattataaaacgaggtagtgaggttcctggcaagttgggcaacccagtgccattt
aagggaacagctgcagcagggggagatgcaaacagaaatcccccacagcagacaaatgaa
catgctgccagtaatggagctccagcacataagccacaacagccgcaaaaacctgcccag
cagaatccatacaatagagaacaagctcaacagtcaactggacaaacaaatagtttctat
ggaaaaaacaatgtcacaccaaaggcatatggaaataataatcttccccagacaccaggt
ggcagcacaccaaaagtctatccaatcactgctcttacaccatatcaaaacaggtggaca
attagagccagactgaccaacaagtccaacattaggacatggagcaattctcgtggagag
gggaaactttttagcatgacattcacagatgagagtggagagatccgggctaccgcattc
aaagcagaagtggacaagttctatgatatactggaagtgaataaggtttactatgtcacc
aaagcaaccttgaaaacagccaacaagcagtactcttcagtggacaatgactacgagatg
accctgaacagagactcccagatagaagagtgcactgaagatgtagatctgccaactgtg
actttcaacttcacacctataaatgcattgggcaacatggcccctaacaccacagtggat
gtgattggtgtggtcaagtccgtggcagatgtttccacaatcattgccaaggcaacacag
aaggagctgaagaaaagggaggtttctttggttgaccaaaatcaggtcatgataaacctc
accctctggggagaaactgcagaaggttttgatggtagcaatcaccctgtactggcaata
aagggtgcaaggctctctgacttcgggggccgttcactctccacactgtccagtagtcag
ttgattgttaatcctgacattgaggaggcccacaggcttaaaggttggtatgacagagat
ggacacaacctggacttccaacagtacaggaatgaggggggacaaggaggttcaggaggc
gcaactaattggaaaagctttgctgctgtaaagcaagaaaacattggagctacagaaaaa
ccagactactattcagccaaaggaacagtgatattcatgaggaaagagaactgcatgtat
caggcctgccctaaaatggattgtaacaagaaggtggttgaccagtcaaatggtttgtac
aggtgtgaaaagtgccagctggagtacccgaactacaaatggaggatgatcttatcggcc
aatcttgcagactattctgacaaccagtgggtgacttgcttccaagaaactacagaaact
ctacttggcaagtcagcagatgaactgggcagtctcagagaatcggatgaggccagcttt
gatcagatattccaggaggccactttcaagtcttacacattcaagctcagggccaagcag
gagacatataatgatgaaagcagactaaagaccattgttgtcaacgccacacctattgat
tatcgggaatacaaccgtaaactgatccaggatattgagaaaatggctggcatgatataa
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integrated database retrieval system
