Lingula anatina: 106180526 Help Entry 106180526         CDS       T04921                                  Name (RefSeq) THO complex subunit 2   KO K12879   THO complex subunit 2 Organism lak  Lingula anatina Pathway lak03013   Nucleocytoplasmic transport lak03040   Spliceosome Brite KEGG Orthology (KO) [BR:lak00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     106180526   09122 Translation    03013 Nucleocytoplasmic transport     106180526  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:lak03019]     106180526    03041 Spliceosome [BR:lak03041]     106180526 Messenger RNA biogenesis [BR:lak03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      106180526 Spliceosome [BR:lak03041]  Complex C   Other components    EJC/TREX     106180526  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     106180526 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  106180526 NCBI-ProteinID:  XP_013419991 UniProt:  A0A1S3KCL0 LinkDB All DBs Position Unknown AA seq 1481 aa AA seqDB search MATCLTLELCKNWEKNGKIEFQKLCKSTLRADGSLVGAREGKKILYDLCWQVLIGNLKQD QAVAVLLEIKDLHEELPSLLADIFSIIDVETQAEEEKPKQRQRFLALVPACLGFISEQVL KERLDFDTLEAVGLIPSKQAFQQKYVKTKTKLYYKQQKFNLLREESEGYAKLIAELGQDV HTLTPDMMLQVIKSLIGFFNLDPNRVLDIILDAFECRPALVDFFVTLLRSYMMDPQRLCH VLGFKFHFYQETVGSETPKSLYKVAALLVQHGLVELDNLYPHLSPSDSDINESFKKEVTS AREYARKLNVVILSDKAKEEKENEDDSGKIKQNNNQKLGLCESLLAVGDWNHAEQIIKRL PQYSATAQPPIAQGLCALLHIILDPLYRQYSGLPAKVFKYTPRLGLSVTQCHTFGDLVTV AFPMLAYLGPSLSCDPKLMVKLIRVLKTFMEKRRSGELMDPMEPVFHGLLTVLDEVLIPS LCMMNCNCGMSEEIWALLKYLPYEHRYLLYGHWKNETYNIEPRLIKIRADCLERAKYIMK RLSKENVKPSGRQIGKLSHSNPGVIFEYILSQIQKYDNFIGPVVDSLKYLTSLSYDVLAY CIIEALANPSRERMKHDDTNISLWLQSLANFSGAIFRKYQIEMAGLLQYVANQLQAGKSF DLLILREIVQKMAGIEISEEITDDQLEALGGGELLKQEGGYFAQVKNIKKSSNRLKETLL EHDLAIPMCLLMVQQRDCIVYQEGGDRFIKLVGKLYDQCQDTLVQFGSFLSTQLSTEEFV KRLPSIEVLVGDYHVAPDAAFFLSRPMYTHAINTKFDELRKIDKSNKNSTNQLKTQRYIE AAASVMEPVIEAVKPVNSPKVWEEISPQFYVTFWSLSIYDLHVPSVAYNKQMDQLRKVQQ AVDETKDMAQSKKKKERERCFALIDKLKDEERKQEEHVQRVVARLKGEKDNWIPARSTKN DTITQFLQVCIFPRCCFTASDAVYCAKFIEVLHELKTPNFSTLICYDRIYCDITYTVACC TENEAHRYGRFLCAAFETIMRWHSDKAVFEKECGSHPGFVTVYRKTDTNNKTNQHGQLDY ENYRHICHKWQFRTTKAMVACLESGDYGQIRNALIVLTKVLQYYPKVLNYGQALERRVDR IRQEEKEKRPDIYALAMGYIGQLKSKKNTWIPEQEFHIKENTRRVQSKQGTTVKTNSQSA PVKSEPNGTGTAATASENGKTASSGRVKEEKDVKQEGKERSKESREREVREGSREERRLE KSDSQSSDRSESRADTGKTPDSKSSEKKEQGSRVSSKEREKEREKDKERRSLSNEPDKEK DKAKDKKDRSEERTQKDKEKKERKEEKEKREEKKEEKRKEGVIKIDKDKEKDKSHKEERH KSREEKEDQKTDKEEKDRHRDHSKSREGKKEKEREEKRKQEDGGKAKEVRTVERASSMAS SVSNHDSHTRSVETAEKGTKRRKIEAPSSSSKVSIVAMEVE NT seq 4446 nt NT seq  +upstreamnt  +downstreamnt atggcgacgtgccttactctcgagttgtgtaaaaactgggagaaaaacggtaaaatcgaa tttcagaagttatgcaagtctaccctgagagcagatggcagcctggttggagcaagagaa gggaagaaaatcctgtatgacctgtgttggcaagttctcattgggaatctcaagcaagac caagcagttgccgtactgcttgaaatcaaggatctgcatgaagagctaccatcacttctg gcagacatcttttcaataatcgatgttgaaacccaagctgaagaagagaaacccaaacaa agacagcgttttctagcattagtaccagcatgcttaggcttcatatctgagcaagtactg aaggaaagattggactttgatactctggaggctgtgggactgataccatccaaacaagct tttcagcagaaatatgtcaagactaaaacaaaattatattacaagcagcaaaaattcaat cttttgcgagaggagagtgaggggtatgccaaactgattgcagagctgggacaagacgtc cacaccttgacacctgatatgatgttacaagtgatcaaatcccttataggatttttcaac ttggacccaaaccgggttctggatataatcctggatgcatttgagtgccgccccgccctg gtggatttctttgtcacattactcaggtcatatatgatggatccacagcgcctctgtcat gtgctgggattcaagtttcacttttatcaggagactgttggcagtgaaacccccaaatct ctctacaaggtggcagcactgctggtgcaacatggtctggttgagctagacaacttgtac cctcatttgagcccctcagatagtgacatcaatgaaagcttcaagaaggaggtaaccagt gccagagaatatgccagaaaactcaatgtcgtcatcctatcagataaggcaaaagaggag aaggaaaatgaagatgattctggtaaaataaagcagaacaacaaccagaagctgggtctg tgtgagtctttgctggctgttggagactggaaccacgcggaacagataatcaagagattg cctcaatattcggccacagctcaacctcctattgctcagggcctgtgtgctcttctgcac attattctggatcctttgtatagacagtacagtggtcttcctgctaaagtgttcaagtac acccccagactgggtctctctgtaacccagtgtcacacctttggggacctggtcacagta gccttccctatgctggcctacctgggccccagcctctcctgtgaccccaaactgatggtc aaactgatacgggtgctcaaaacattcatggaaaagagaaggtcaggagaattgatggac cctatggagccagtatttcatgggttgctgacagtgttggatgaggtgctgattcccagt ctgtgtatgatgaactgcaactgtggaatgagtgaggaaatctgggccctgctcaagtat ttaccctatgaacacaggtatcttctttatgggcattggaaaaatgaaacatacaacatt gaacctagattgatcaaaataagagcagattgcctagaacgtgctaagtatatcatgaag agattgtccaaagaaaatgtaaagccttcaggtcgtcagattggaaaactaagtcacagc aaccctggggttatttttgaatatatcctgtctcaaattcagaagtatgacaactttata ggacctgtggtggattccttgaagtatctcacttccctttcctatgatgtattagcttat tgtattatagaagctcttgctaacccatccagagagagaatgaagcatgatgatactaac atatcactgtggctgcagagtcttgccaacttcagtggcgccatctttaggaagtatcag atagaaatggcaggtttactgcagtatgtggccaaccaactccaggcaggaaaaagcttt gacctgttgatcttgcgtgaaatcgtacagaagatggcgggtatagagatctcagaggag attacagatgaccagttagaggctctgggtggaggagagctcctaaaacaggagggtgga tattttgctcaggtcaagaacatcaagaaatcctcaaatcgtctaaaggagaccctgtta gaacatgacctggccatccctatgtgtctgctgatggtgcagcagagagattgtatagtg taccaggagggaggggacaggtttatcaaactggtggggaaattatatgatcagtgccaa gacaccctggtccagtttggcagcttcctgtccacccagctgagtacagaggagtttgtg aagagattgccctccatagaagtactggttggagattatcatgtagcaccggatgccgct tttttcctttcaagacctatgtatactcatgcaatcaatacaaaatttgatgagcttaga aaaatagataaaagcaataaaaatagtaccaatcaactgaagactcagaggtacatagag gcagcagcatctgtgatggagccagtgatagaggctgtgaaaccagtcaactctccaaag gtgtgggaggaaataagtcctcagttctatgtgacattctggtccctgtccatctatgac ctccatgtccccagtgtggcctataataaacaaatggaccagctgaggaaggtccagcaa gcagtggacgagaccaaggacatggctcaaagcaagaagaagaaggagcgagagaggtgc tttgccctgatagacaaactgaaggatgaggagaggaaacaggaggaacatgtccagagg gtggtggccagactgaagggagagaaagacaactggattcctgcacgctccacaaaaaat gacacaatcacgcaattcctccaagtttgcatttttcctcgctgctgtttcactgccagt gatgccgtctactgtgcaaagtttatagaggttctacacgagctgaagactccaaatttc tccactcttatctgctatgataggatatactgtgatattacctatactgtggcttgctgt actgagaatgaagcccacagatatggcaggttcctctgtgcagcatttgaaactatcatg aggtggcactcagacaaggctgtctttgaaaaggagtgtggtagtcatccaggttttgtc acagtgtacaggaagactgacaccaataacaagaccaaccaacatggccagctggactat gagaactacaggcatatctgtcacaaatggcagtttagaactaccaaggcaatggtggct tgtcttgaatcaggagattatggacaaatcaggaatgctctcattgtgctcactaaggta ctccaatactaccccaaagtcctgaactacggccaggctctggagaggagggtggacagg atacggcaggaggagaaggagaagagaccagacatctatgctctagcaatgggctacatc gggcagttgaagagcaaaaagaacacgtggattccagaacaagagtttcatattaaagaa aatacgcggcgtgtacagagcaaacaaggcaccacagtgaagaccaacagccagtcagca ccagtgaagtctgaacccaatggtacagggactgcagccacagcctcagagaatggaaag acggcaagttctggcagagtcaaagaagagaaggatgtgaaacaagaagggaaggagaga agcaaggagtccagagagagagaggtgagggaagggagcagggaggagagaagactggag aaaagtgacagtcagagctctgacaggtctgagtccagagcagacactgggaagacacca gacagtaaatcttcagagaaaaaggaacaagggtccagggtttctagcaaagaaagagaa aaggaaagggagaaggacaaggaacgtagatctctaagtaatgaacctgacaaagagaaa gacaaggctaaagacaagaaggacaggagtgaagagagaactcagaaagacaaagagaag aaggaaaggaaagaagagaaggaaaaaagagaagagaaaaaggaagagaaacgtaaagaa ggtgtgataaagatcgacaaagataaagagaaagataaaagccacaaggaagaaagacac aaaagcagggaagaaaaagaggaccagaaaactgacaaagaggagaaagaccgccataga gaccacagcaaaagccgagaaggaaagaaggagaaggagagggaagaaaagaggaaacag gaggatggtggaaaggccaaggaagtgcggacagttgaaagggcgagcagcatggcctcc agtgtcagcaatcatgactcccatacccgcagtgtagagacagcagaaaaaggtaccaag cgacgcaaaatagaagccccgtccagttcgtcaaaggttagtatagttgctatggaagtg gaatga

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