Lingula anatina: 106180750 Help Entry 106180750         CDS       T04921                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism lak  Lingula anatina Pathway lak03040   Spliceosome Brite KEGG Orthology (KO) [BR:lak00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     106180750  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:lak03019]     106180750    03041 Spliceosome [BR:lak03041]     106180750 Messenger RNA biogenesis [BR:lak03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      106180750 Spliceosome [BR:lak03041]  Complex B   Other components    Prp19-related factors     106180750  Complex C     106180750 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_2 TPR_12 TPR_8 TPR_15 ARM_TT21_C TPR_7 ARM_TT21 TPR_1 TPR_16 RPN7 DUF3987 PPR TPR_10 TPR_11 Motif Other DBs NCBI-GeneID:  106180750 NCBI-ProteinID:  XP_013420306 UniProt:  A0A1S3KDH1 LinkDB All DBs Position Unknown AA seq 847 aa AA seqDB search MPVLKGKADIYFEEEDLPYEEEILRNPYAVKCWLRYIDHKKAAPKNAVNMIYERALKELP GSYKLWYNYLKLRRQQVKGHCITDPLYESVNNAFERALVFMHKMPRIWLDYCQFLMDQSK ITLTRRTFDRALRALPITQHNRIWPLYLTFVKKYPLQETAVRVYRRYLKLFPENAEEFIN YLTTIDWLNEAAKKLADTINDEDFVSKAGKSKHQLWNELCESITKNPDKISDLKVEPILR QGIKRYSDQVGLLWNSLADYYIRGGNFERARDIYEEAIQTVLTVRDFTQVFDAYAQFEES MISARMETTAEIGPTEEDDLDLELRLARMEELMDRRPLLLNSVLLRQNPHNVHEWHKRVQ LYEGKPREIINTFTEAVQTVDPRLASGKPHTLWVEFAKFYDTAGQIEDARIIFEKATKVA YVKVDDLASVWCEWAEMEIRHENYEEAIKLLQRATALPPRKVDYHDISEPVQNRLYKSLK VWSLYADLEESFGTYKTCKAVYDRIIDLRIATPQIIINYGMFLNENNYFEEEFKAYEKGI ALFKWPNVYDIWNTYLTKFIERYGGKKLERARDLFEQCLEKCPPKFAKAIYLLYAKLEED HGLARHAMSVYDRATKGVLPEEQYEMFNIYIKRAAELYGVTHTRPIYEKAIEVLNEEQAR SMCLKFADLERKLGEIDRARAIYGHCSQMCDPRITAEFWQTWKDFEIQHGNEDTVREMLR IKRSVQATFNTQVNFMSAQMLAAQSTKEEAASEEKNEMEKLEERARQLAEEAVRDQPKPQ KGILFVRSNTTEEELGEMTKTNNPEEINIDEDFESDEEETVEEVHLEKQAIPSAVFGTLD KDDDDDD NT seq 2544 nt NT seq  +upstreamnt  +downstreamnt atgcctgtcttgaagggaaaagcggacatatattttgaggaagaggatcttccatacgaa gaagaaattctaagaaatccatatgcagtgaagtgttggcttaggtatattgaccacaag aaagcagcacccaagaatgcagtcaacatgatctatgaaagagcgctaaaagagctccca ggaagctacaagctctggtacaactacctgaagctaaggagacaacaggtcaaaggtcat tgtatcacagatcctttatatgaaagtgtcaacaatgcctttgaacgtgctttggttttc atgcataagatgcctaggatctggttagactattgtcagtttctaatggaccagagtaaa atcaccctgacgagaaggacctttgaccgcgccctgcgtgcactccctatcactcaacac aatagaatatggccactgtaccttacctttgtcaaaaaatacccacttcaagaaacagct gtcagggtatataggaggtatttaaagctcttcccagaaaatgctgaagagtttattaat tatttgactacaattgattggctgaacgaggctgccaagaaattagcggacaccatcaat gacgaagattttgtttctaaagcagggaagtctaagcatcagctttggaatgaattatgt gaaagtataacaaaaaacccagacaagatctcagatttgaaagtggagcccattttgaga caaggcataaagagatactctgaccaagttggccttttatggaattcactggcagactat tacattagaggagggaattttgaaagggcacgtgatatctatgaggaggccatccaaact gttctgacagtgagggatttcacacaggtatttgatgcatatgcacagtttgaggagagc atgataagtgccaggatggaaaccacagcagagattggtccaactgaagaagatgacctt gacttagagctgcgattggctaggatggaggagctgatggacaggcggcctctactgtta aacagtgttcttctgaggcaaaacccacacaacgtccatgagtggcataaaagagtgcag ctttatgagggaaagccaagagagataatcaacaccttcactgaggctgtgcagacggtg gaccccaggctggcctctgggaaaccccatacattgtgggtagagtttgccaagttttat gacactgctgggcaaattgaggatgccaggatcatctttgaaaaggcaaccaaagtggca tacgttaaggtggacgacctggcttcagtttggtgtgagtgggccgaaatggaaataaga cacgagaattatgaagaagccattaaacttcttcaaagggccacagcattgcctccaagg aaagtagactatcacgacataagtgaacctgtacagaacagattgtacaagtccctgaag gtgtggtcactgtacgctgacctggaggagagctttggcacctacaagacatgtaaagct gtgtatgacagaataatagacctgagaatagccactcctcagatcatcatcaactatggc atgtttctgaatgaaaataactactttgaggaagaatttaaggcatatgagaaagggatt gccttgttcaaatggcccaatgtgtacgacatctggaacacatacctcaccaagttcatt gaaagatatggtggaaaaaagctggagagagctcgagatctgtttgaacagtgcctggaa aagtgcccacctaagtttgctaaagctatctatttactgtatgccaaactggaggaggat cacgggcttgcgagacacgccatgtctgtgtatgatagagcgactaaaggagtgttacca gaggagcagtatgagatgttcaacatctacatcaagcgagctgcagagctgtatggagtg acccacaccagaccaatctatgagaaagccattgaagttttgaatgaagaacaggccagg agtatgtgcctcaagttcgctgatcttgaaaggaaactgggagaaattgaccgtgctcga gccatctatgggcattgttcacagatgtgtgatcccaggattactgcagaattttggcag acgtggaaagactttgaaatccaacatggcaacgaggacactgtgcgagaaatgttgcga atcaaacgaagtgtccaggcgacgttcaacacccaggtcaattttatgtcagcccagatg cttgctgcacagtccactaaagaagaggctgcttcagaagaaaagaatgagatggaaaaa cttgaagaaagagcacgtcagttggctgaagaagcagtgcgagaccaacccaaacctcag aaaggaatattgtttgttaggagtaatacaactgaagaagaacttggtgaaatgacgaag accaacaatccagaagagatcaacatagatgaagactttgaaagtgatgaagaagaaaca gttgaagaagtgcacctggagaaacaagccattccgtcagcagtttttggaacattggat aaggatgatgatgatgatgattaa

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