Lingula anatina: 106182010
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Entry
106182010 CDS
T04921
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
lak
Lingula anatina
Pathway
lak03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106182010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lak03021
]
106182010
03019 Messenger RNA biogenesis [BR:
lak03019
]
106182010
Transcription machinery [BR:
lak03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
106182010
RNA polymerase I system
106182010
Messenger RNA biogenesis [BR:
lak03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
106182010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW2_Spt5
KOW
KOW5_SPT5
KOW7_SPT5
KOW6_SPT5
Spt5-NGN
KOWx_SPT5
Spt5_N
KOW1_SPT5
CTD
GPKOW_C
DUF5847
Motif
Other DBs
NCBI-GeneID:
106182010
NCBI-ProteinID:
XP_013422071
UniProt:
A0A1S3K4F0
LinkDB
All DBs
Position
Unknown
AA seq
1061 aa
AA seq
DB search
MSDSEGSVYSEDEKDRRSEDEDEGSDIGRKGRRIHDSEAEEGEEEDPEPEEEPEGEDLDD
DDEEYDSEEYEDTDVRHKRKKSKHSGFILEEADVDEEGEEDEEDLEWEEGAEDIIDRKTG
FEGPSARDIESRRRMEQMWSTQNEDEIEEYYRRKYADSSMAERFGEGEEMSDEITQQGLL
PGVKDPNLWVVKCRMGEEKATVIALMRKFIAYQFTDEPLQIKSVIAKEGLKGYIYVEAYK
QTHVKQAIEGVGNLRMGMWQQQMVPIKEMTDVLKVVKETVHLKAKAWVRLKRGLYKDDLA
QVDYVEPSQNVVHLKLIPRIDYSKMRGVLRSSANEPEKRKRAKRPTQKLFDIDAIRSIGG
EVTSDGDFFIFEGNRYSRKGFLFKSFVMAAIVAEGVKPTLSELEKFEDQPEDASVELVPE
SRSVSEVSHNLAPGDNVEVCEGELIHLQGKVISIDGNKITMMPRHEDLKDPLEFPAHELR
KYFKMGDHVKVISGRYEGDTGLIVRVEDNMVVLFSDLTMHELKVLPKDLQLCTDRATGVD
TMGQFQFGDLVQLDPQTVAVIVRLEKESFQVLNMHGKVVHVKHQAVSKRRDSTRAVALDA
ENNNIQVKDIVKVIDGPHSGRQGQIKHLYRSYAFLYSRMMTDNGGIFVCRTRHLVLAGGS
KVTSTGPMLAGYMSPRLSSPAHPSGGGGGAGGPGGAGRGRGTSNRDRGLIGQTVRIIQGS
YKGYIGIVKDATDTTARVELHSSCKTISVDKTRIRSVSDGRPGGASSYTPRTPMYGSGGQ
TPMYGSRTPMYGSQTPLHDGSRTPHYGSQTPLHDGGGRTPAWDPTQSNTPARANDFEYNF
DEASPSPAGVDYGTPNPATPGYSADTPSPAGGPYTPQTPGSSYSYQSSPSPGGYTPSPGG
YIPTPSPQGYGSNTPSPSGYGSTPSPMGYSPMTPGAPYTPQTPGTGMEHGAADWHTTDIE
TRIKDTHDDPNLIHQIGVIRGISAGMCSLFLPEDEKVITVSCEQLEPVVPTKGDRVKVII
GEEREACGQLLSIDGMEGVVKTDHGDLKMLQMRCLCKMPPA
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatagtgaaggaagtgtatattctgaagatgagaaggataggagaagtgaggat
gaagatgaagggagtgatattggaagaaaggggcgtaggattcatgacagtgaggcagag
gaaggcgaggaagaggatccagaaccagaggaagaaccagaaggagaggacctggatgac
gatgatgaggagtatgattctgaagaatatgaagatactgatgtcagacataaaagaaag
aaatcaaagcattcaggattcatcttagaagaagctgatgttgatgaggagggtgaggaa
gatgaggaagatctagaatgggaagaaggtgctgaagacattatagaccgtaagactgga
tttgaaggtcctagcgccagggacattgagagcagaaggcgcatggagcaaatgtggagc
actcagaatgaagatgaaattgaagaatactacagacgcaagtatgctgacagctccatg
gcagagaggtttggagaaggagaggaaatgtctgatgagatcacacagcaaggattgttg
cctggtgtaaaagatccaaatctatgggtagttaagtgtagaatgggtgaagaaaaagcc
acagttattgccttgatgaggaagttcattgcctatcagttcacagatgagcctttgcaa
atcaaatctgtgatagccaaagaggggttgaagggctacatttatgtagaagcctacaag
cagacccacgtcaaacaagccatagagggagtgggcaacttgagaatgggaatgtggcaa
caacagatggttcccatcaaagagatgacagatgtattgaaagtggtgaaggagacagtt
caccttaaagcaaaggcttgggtgagactgaaaagagggctgtacaaggatgatctggca
caggtggactatgtggagccctcacagaatgtggttcacctgaagcttattcctaggatt
gattacagcaaaatgaggggtgttttaagatcaagtgccaatgagccagagaagaggaaa
agagccaagcgaccaacacagaaattgtttgatatagatgccatcaggtcaattggtggt
gaggtgacatcagatggagatttcttcatctttgaaggcaacagatacagtcgcaaagga
tttctattcaagagctttgttatggctgcaatagttgcagagggtgtgaagcctacattg
tcagagttggagaagtttgaggaccagcctgaagatgcttcagtggaactggttccagaa
tctcgcagcgtgtctgaagtctctcacaacctggcacctggagacaatgtggaagtgtgt
gagggagaattgatccatctccagggcaaagtgatcagcattgacggcaataagatcacc
atgatgcccaggcatgaagatctcaaggatccactagagtttcctgcccatgagttacgc
aagtacttcaaaatgggcgaccatgtcaaagtgatctcgggcaggtatgagggggacact
ggactgattgttcgtgtggaggataacatggtggttttgttctcagacttgactatgcat
gagttgaaagttctgcccaaagatctgcagttatgtactgacagagccactggtgtagat
accatgggacagttccagtttggagacctggttcaactagatcctcagacagttgcagtc
attgtccggctggaaaaggagagtttccaggtcttgaacatgcatggcaaggtggttcat
gtaaaacaccaagctgtatccaagagaagggattctaccagagctgttgctttggatgca
gagaataacaatatccaggtcaaggacattgtcaaggtcattgatggcccccattctggt
cgtcaaggtcagataaagcacctgtaccgtagctatgcattcctgtattctcgcatgatg
acagacaatggaggcatatttgtgtgcaggaccaggcatttagttctggctggagggtcc
aaggtcacttctacaggccccatgctggcaggttatatgtctcctcgcctgtccagtcct
gctcaccccagtggtgggggtgggggtgctggggggccaggtggcgcagggcgtggccgg
ggaaccagcaacagggataggggtctcattggacagactgtcaggatcattcagggctca
tataaaggttacattggtattgtcaaggatgccacagatactactgctagagtggagtta
cattccagctgcaaaaccatctcggtggataaaacaagaatacgttcagttagtgatggc
cgtccaggtggcgcttcatcttacacacccaggacgccaatgtacggaagtggtggccag
acccccatgtacggctcacgtacacccatgtatggctctcagacacccctccatgatggc
agcagaaccccccactacggcagccagacccccttacatgacggtggaggaaggactcct
gcctgggatcccacgcagtctaacactcctgcaagggccaacgactttgagtacaacttc
gatgaagcatccccatcccctgctggtgtggattatggcacacctaaccctgccacccct
gggtattctgctgacacccccagtcctgcaggggggccatacaccccgcagaccccaggg
agcagttactcctaccaatcctcaccttctcctggagggtacacaccaagccctggagga
tacatccccaccccgagtcctcaggggtatggcagtaacacaccatccccctctggttat
ggtagcaccccatcacccatggggtacagtcctatgacccccggggcaccatacacacca
cagacacctggaacaggcatggagcatggtgctgcagactggcataccactgacatagag
acgagaatcaaagacacccacgatgatcctaacctgatccaccagataggcgtcataagg
ggaatctcggctggcatgtgctccctgttcttacctgaagatgagaaggtgatcacagtg
tcctgtgaacagctggaaccagtggtgcccactaagggggacagggtaaaagtgatcatt
ggtgaagaaagagaggcctgtggtcagcttctgtccattgatggcatggagggagtggtc
aagactgaccatggagacttaaaaatgttgcagatgagatgtctttgtaagatgccacca
gcctga
DBGET
integrated database retrieval system
