Lacimicrobium alkaliphilum: AT746_02090
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Entry
AT746_02090 CDS
T04189
Name
(GenBank) transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
lal
Lacimicrobium alkaliphilum
Brite
KEGG Orthology (KO) [BR:
lal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lal03000
]
AT746_02090
Transcription factors [BR:
lal03000
]
Prokaryotic type
Helix-turn-helix
Other families
AT746_02090
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
MarR
Rep_fac-A_C
Trp_repressor
Motif
Other DBs
NCBI-ProteinID:
ALS97187
UniProt:
A0A0U2Z2R1
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Position
complement(443186..444037)
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AA seq
283 aa
AA seq
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MDIVSRIHNQLSHLRPAEQKVARYILGDLNYAASASINELASKAKVSHASITRLAQALEC
KNVRELKMLLAQSAAVGERFIADKPVSRKDIPPVYQAIHDILDINAGLITDEAIEKASQL
LTRADHVLIFGVGGGSTFMAQECHNRLFRLEVKSNAYSDPMMMRMTAATVNPDDVVLCLS
LSGVSPDVMASAQIAKEYGAHLLAICPEGPLADAVDLHLPIKTQEAEYIFNPSASRYAML
AAIDVVAGEVAVVNQRKSREKLRRLKHHLDQHRKGSERLPLGD
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggatattgtttctcgcatacacaaccaactttctcacctgcggcccgcagaacaaaag
gtcgcccgctatattctcggtgaccttaactacgccgccagtgcttctatcaatgagctg
gccagcaaggccaaggtcagccatgccagcattacacgactggctcaggcgctggaatgt
aaaaatgtgcgtgaactgaaaatgctgctggcccaatcggccgccgtcggcgagcgcttt
attgccgataagcccgtcagccgcaaggatattccgccggtttatcaggccatacatgac
attctggatatcaacgccgggctgatcaccgatgaggccattgagaaggcaagccagttg
ctgacccgcgccgatcatgtgctgatcttcggcgtcggtggcggcagtacctttatggcc
caggaatgtcacaaccgcctgttccggctggaagtgaaaagtaacgcctactcggatcct
atgatgatgcgcatgaccgccgccacggtgaaccccgatgatgtggtgctgtgcctgtct
ttaagcggtgtcagccccgatgtgatggcctcagcccagatagccaaggaatatggcgcc
catctgctggcgatttgccccgaagggccgctggccgatgccgtggatctgcacctgccg
attaaaacccaggaagccgagtatattttcaaccccagcgcctcccgctacgccatgctg
gcggcgattgacgtggtcgccggtgaagtggcggtggtcaatcagcgtaaatcccgtgag
aagctgcgccgcctcaaacaccaccttgatcaacaccgaaagggctcagagcgcctgcca
ctaggagattag
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