Lacimicrobium alkaliphilum: AT746_02530
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Entry
AT746_02530 CDS
T04189
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lal
Lacimicrobium alkaliphilum
Pathway
lal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AT746_02530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lal03021
]
AT746_02530
03400 DNA repair and recombination proteins [BR:
lal03400
]
AT746_02530
Enzymes [BR:
lal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AT746_02530
Transcription machinery [BR:
lal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AT746_02530
DNA repair and recombination proteins [BR:
lal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AT746_02530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ALS97264
UniProt:
A0A0U3AWJ0
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All DBs
Position
524932..525921
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AA seq
329 aa
AA seq
DB search
MSGSVTEFLKPRLVEIDNVSPTRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDVIEILLNLKGLAVRLEGKDEANLTLVKSGSGPVVAGDIQHDGD
VEIVNPDHLICTLTGDASINMRIKVEKGRGYVPAAARRTSEEDERPIGRLLVDASFSPVE
RIAYAVESARVEQRTDLDKLIIDMETNGTIDPEEAIRRSATILAEQLDAFVELRDIKEPV
AKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIQYIGDLVQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPESIAEKD
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggttctgtaactgaattccttaaaccaaggttagtcgagatagataacgtatcc
ccaactcgcgccaaggtgacccttgagccgctggagcgtggctttggtcatacgctgggc
aacgcattgcgtcgcattctgttgtcatccatgcccggatgcgccgtaacagaagtggaa
attgatggcgtactgcacgagtacagtaccaaggaaggtgtccaggaagacgttatcgaa
atactgttgaacctcaaaggtttggcagtgcgtctggaaggaaaagatgaagccaatctg
accctggttaaatctggttcaggcccggttgtagcgggtgacatacagcatgacggtgat
gtggaaatcgttaatcccgatcacctgatctgtactttaaccggtgatgcgtctatcaat
atgcgcattaaagtggaaaaggggcgtggatatgttcctgccgctgcccgccgcacctct
gaagaagacgagagacccattggtcgtttgttagtcgatgcttctttcagtccggttgaa
cgtattgcttatgcagtagagtctgcgcgtgtagaacagcgtactgacttggataaattg
attatcgatatggaaaccaacggcactatcgatcctgaggaagccattcgtcgctctgcc
actattctggctgagcaactggatgccttcgtagaacttcgggatattaaagagcctgtt
gccaaagaagagaagccggagttcgatcctatcctgcttcgtcctgttgatgatctggaa
cttaccgtacgttcagctaactgtcttaaggcagaagctatccagtacatcggtgatctg
gtgcagcgcacagaagtcgagttacttaaaacccctaatctgggtaaaaagtctctgacc
gaaattaaagatgtgctcgcttctcgtggtctctcattgggtatgcgcctggaaaattgg
cccccagagagtatcgctgagaaagactaa
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