Lacimicrobium alkaliphilum: AT746_02790
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Entry
AT746_02790 CDS
T04189
Name
(GenBank) hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
lal
Lacimicrobium alkaliphilum
Brite
KEGG Orthology (KO) [BR:
lal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lal03016
]
AT746_02790
Enzymes [BR:
lal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AT746_02790
Transfer RNA biogenesis [BR:
lal03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AT746_02790
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Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ALS97303
UniProt:
A0A0U2ZDV5
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All DBs
Position
complement(577418..578059)
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AA seq
213 aa
AA seq
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MFVHTYIKYLKHSKPYTKIDFSASAYSIMRLFFGLELTPSVKLSIEKWREINLPPLAGPV
PAANFHITLAFLGTVPVHQQEALLAQADRLTNQAFNLTIDQMGYWPRPRTLWIGPSVVPV
ALNNLAGNLSAIAGRLGLPGENRDYVPHISLYRKQASNPPVCLMQPDISASFEQFCLFES
RPGRQGVQYHVLARWPLDSGLSIREKLARGKLD
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcacacttatataaagtaccttaaacattcaaagccctacacaaaaatcgat
ttttcagcatctgcatacagtattatgagattattctttggtcttgaactgactccgtcg
gtaaagctcagtatagagaagtggcgtgagattaacctgccgccactggcagggccggtg
cctgcggcaaattttcatattacattggcctttctgggcacagttcccgtgcatcaacag
gaagcacttttagcgcaggcggatcggctgacaaaccaggctttcaacctcaccattgat
caaatgggctactggcccagacccagaaccctctggattggcccctcggtggtgcctgtt
gcgttaaacaacctggccggtaatctctcagccatagcaggcagactgggactgcctgga
gagaaccgggattatgttccccacatcagcttataccgtaaacaggccagtaatcctcct
gtctgtctgatgcagccggacatcagtgcaagcttcgaacagttctgtttgtttgagtca
cgcccgggtcgtcagggcgttcaatatcatgtactggcgcgctggccactggatagcgga
ctgagtattcgtgaaaagctggcacggggaaaactggattag
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