Lacimicrobium alkaliphilum: AT746_05445
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Entry
AT746_05445 CDS
T04189
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lal
Lacimicrobium alkaliphilum
Pathway
lal03030
DNA replication
lal03430
Mismatch repair
lal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AT746_05445 (dnaE)
03430 Mismatch repair
AT746_05445 (dnaE)
03440 Homologous recombination
AT746_05445 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lal03032
]
AT746_05445 (dnaE)
03400 DNA repair and recombination proteins [BR:
lal03400
]
AT746_05445 (dnaE)
Enzymes [BR:
lal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AT746_05445 (dnaE)
DNA replication proteins [BR:
lal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AT746_05445 (dnaE)
DNA repair and recombination proteins [BR:
lal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AT746_05445 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ALS97774
UniProt:
A0A0U3A9U3
LinkDB
All DBs
Position
1204207..1207674
Genome browser
AA seq
1155 aa
AA seq
DB search
MAEPDFVHLRVHSDFSMMDGLNKTGPILDKVRALNMPAVAITDQMNLCGLVRFYDKAHSL
GIKPIIGADFWIQSDALGEQIYRLTLLAKNNQGYQNITQLISRAYLRGHIQERPVIDQSW
LAEHAEGIILLSGAMQGDLGIALSKGNGELAEDIVAFYQRHFAGHYYLELMRTGRPGEED
YLHRAVDIARQHQLPVVATNEVCFLEARHFDAHEIRVAIHDGYTLDDKRRPKRYSAEQYL
RSSEEMAQLFADIPEALQNSVEIARRCNVTVRLGEYFLPKFPTGDMTDEDFLVMKSEQGL
EERLAFLFPDSQERQAKRGEYDERLKIELQVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVAD
LYGREAVSQIITFGTMAAKAVVRDVGRVLGHPYGFVDRISKLIPGDPGMTLSKAFEVEPR
LPETYAQDEEVRDLIDMARILEGVTRNAGKHAGGVVIAPTKITDFSPLYCDEHGQYPVTQ
FDKNDVETAGLVKFDFLGLRTLTIIQWALDMIKSGQGKDIDITAIPLIDSPSFKLLQNAE
TTAVFQLESRGMKDLIKRLRPDSFEDIIALVALFRPGPLQSGMVDNFIDRKHGREEISYP
DAQYQHECLQEILEPTYGIILYQEQVMQIAQVMAGYSLGEADLLRRAMGKKKPEEMAKQR
EVFRTGAAKNNIDPDLAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPAEFMA
AVMSADMDNTDKIVTLVDECQRMGLTVLPPDVNTGQYKFSVNGQGQIVYGIGAIKGVGEG
PIDAIIEARAKDGGFSDLFDFCARLNLKRINKRVLEKLVLAGAMDNLGPHRASLMASLPE
AIAAADQHARAQSFGQEDMFGLLNTEPEQVQQAFADVPQWQEKVWLDGERETLGLYLTGH
PINQYQQEIRHYSHGRLVDIKPTGREGSATVVGLVIDMRVLVNKKGRRWAIVTLDDKSAR
MDVRFFPDMLEEYEAVLQKDKILVISGQVSFDDYSGGNTMSAREVMDIIQAREKNARAVI
LQIQQQQCSMAQVAQLKGLLSQFQGGTCPVHFDYYHPHAQAVLAVSANWYVTPDDDLLHQ
LQQVLGEEQVRLEFH
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccggatttcgtacacctgcgggtgcacagcgacttttcgatgatggatggc
ctgaataaaaccgggccgattctggataaggtcagggcgcttaacatgccggcggtagcg
ataaccgatcagatgaatctctgcggcctggtacgtttttatgacaaggcccatagtctg
ggcattaaacccattatcggtgccgatttctggattcagagtgacgcactgggcgaacag
atttatcgtcttaccctgctggcgaagaataatcagggctatcagaatattacccagctt
atttcccgggcttatttgcgcgggcatattcaggaacgcccggttattgatcagagctgg
ctggcagaacatgctgagggcattattctgctcagtggcgccatgcagggcgatctgggc
atcgccctgagcaaaggcaatggggagttggcagaggacatagtggctttttaccagcgc
cattttgccggacattattatctggagctgatgcgcaccggccgccccggtgaagaagat
tatctgcatcgggcggtggacattgccaggcaacatcagttacctgtggtggcgaccaat
gaagtgtgttttctggaggcccggcacttcgatgcccatgagattcgggtggctattcat
gatggttacaccctggacgataaacgccggccaaaacgttatagcgcggagcagtatctt
cgcagcagtgaagagatggctcagctgtttgccgatattcccgaagccctgcaaaacagc
gtagagatcgccaggcgctgcaatgtgacggtgcgtctgggcgaatactttctgcccaaa
tttcctaccggtgacatgaccgatgaagacttcctggtgatgaagtctgagcaggggctg
gaagagcggctggcatttttatttcccgattcgcaggagcgtcaggccaaacgtggcgaa
tatgatgagcggctgaagatagaactgcaggtcatcaaccagatgggttttcccggttac
tttctgatcgtgatggaatttattcaatggagtaaagataacggtattccggtgggaccg
gggagaggctcaggtgccggttctctggtggcctatgcgctgaaaattaccgaccttgac
ccgctggagtttgacctgctgttcgaacgttttcttaatcctgaacgggtatccatgccg
gattttgatgtggatttctgcatggaccggcgggatgaagtgatcgatcacgtggcggat
ctttatggtcgcgaagcggtctctcagattatcaccttcggcaccatggcggccaaggcc
gtggtgcgcgatgtgggcagggtgcttggacacccctatgggtttgtcgacaggatttcc
aagctgatccccggcgaccccggtatgaccctgtccaaagcctttgaggtagaaccccgt
ctgccggaaacctatgctcaggacgaagaggttcgggatcttatcgatatggcccgcatc
cttgagggggtcacccgtaatgccggtaaacacgccggtggcgtggtgattgcgccgact
aaaatcactgacttttcacctttatattgtgacgagcatggtcagtatccggttacccag
tttgacaaaaacgatgtggaaacggccgggctggttaagttcgactttctgggactgcgc
accctgaccattatccagtgggcgctggatatgatcaaaagcggtcagggcaaagacatt
gatatcaccgctattcctcttatagattcccccagtttcaaactgttgcagaatgccgag
accacggcggtgtttcagcttgaatccaggggcatgaaggatctgatcaagcgcctgcgc
ccggacagttttgaagacattatcgccctggtggcgctatttcggcccgggccgctgcaa
tctggcatggtggacaactttatcgaccgtaaacatggtcgcgaagaaatttcctatccc
gatgcgcagtatcagcatgaatgcctgcaggaaattcttgaacccacctacggtattatt
ctgtaccaggagcaggtgatgcagatcgctcaggtgatggccggttatagccttggcgaa
gccgacctgctgcgccgggcaatgggtaagaaaaagcccgaggagatggccaaacaacgg
gaagtgttcagaaccggagcggcgaaaaacaatattgatcctgatctggcgatgaagatc
ttcgatctggtggagaaatttgccggctatggattcaacaagtcccattcggccgcctat
gcactggtgtcttaccagacgctgtggctgaaaacccattatccggccgagtttatggcg
gcggtgatgtcggcggacatggacaataccgataaaatcgtcaccctggtggatgaatgt
cagcgtatggggctgacagtattgcccccggatgtgaataccggtcagtataaattttcg
gttaacggccaggggcagattgtttacggtattggcgctatcaagggagtgggtgaaggc
cccattgatgccattatcgaagccagagccaaagacggcggcttcagtgacctgtttgac
ttctgtgcgcggctgaaccttaaacgcatcaataaaagggtactggaaaagctggtgctg
gccggtgccatggataaccttggcccccaccgcgcctctttgatggccagtttaccggag
gctatcgccgccgccgatcagcatgccagggctcagtcctttggtcaggaagacatgttt
ggtctgctgaataccgagcctgagcaggtacaacaagcctttgccgatgtacctcagtgg
caggaaaaagtctggctggatggcgagcgcgagacgctggggctgtatcttaccggccac
cccatcaatcagtatcagcaggaaatccgtcactacagccatggccgtctggtggatatc
aagcccaccggcagggagggcagtgccactgtcgtggggctggtgatcgacatgcgggtg
ttagtgaataagaaggggcggcgctgggcgattgtgacactggatgataaaagtgccaga
atggacgtacgtttcttccctgatatgctggaagaatatgaagctgtgctgcaaaaagat
aaaattttggtaatatcaggacaggtcagctttgatgactattccgggggcaatacaatg
tcggcccgtgaagtgatggacattattcaggccagggaaaaaaatgccagagcggttata
ctgcaaattcagcagcaacagtgcagcatggcgcaggtggcacagttaaaagggttattg
agtcagtttcaggggggaacctgtccggttcatttcgattattatcaccctcatgcgcag
gccgtattggcggtttccgccaactggtatgtcaccccggatgatgatttactgcatcag
ttacaacaggtattgggagaagagcaggtcaggctggaatttcattaa
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