Lacimicrobium alkaliphilum: AT746_05730
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Entry
AT746_05730 CDS
T04189
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
lal
Lacimicrobium alkaliphilum
Brite
KEGG Orthology (KO) [BR:
lal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lal03032
]
AT746_05730
03036 Chromosome and associated proteins [BR:
lal03036
]
AT746_05730
03400 DNA repair and recombination proteins [BR:
lal03400
]
AT746_05730
DNA replication proteins [BR:
lal03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AT746_05730
Chromosome and associated proteins [BR:
lal03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AT746_05730
DNA repair and recombination proteins [BR:
lal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AT746_05730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
Trp_ring
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ALS97818
UniProt:
A0A0U2RKM1
LinkDB
All DBs
Position
1266013..1266285
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AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAAGADISKAAAGRSLDALTDAVTEALKNGDQVALVGFGTFSVRERAARSG
RNPQTGATIQIAAAKVPSFKAGKALKDACN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagtctcaactaatcgataagatcgctgccggcgctgatatttcaaaagccgct
gcaggtcgttcgttagacgcattgaccgatgcagttactgaagcgttgaaaaacggtgat
caagttgctttggttggttttggtactttctctgtacgtgaacgtgctgcccgtagcggc
cgcaatccacaaacaggtgcaactatccagatagccgcggccaaagtgccttctttcaaa
gctggtaaagcgctgaaagacgcctgtaactaa
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