KEGG   Lacimicrobium alkaliphilum: AT746_06345
Entry
AT746_06345       CDS       T04189                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
lal  Lacimicrobium alkaliphilum
Pathway
lal02024  Quorum sensing
lal03060  Protein export
lal03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    AT746_06345
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AT746_06345
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AT746_06345
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lal02044]
    AT746_06345
Enzymes [BR:lal01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     AT746_06345
Secretion system [BR:lal02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   AT746_06345
  Eukaryotic Sec-SRP protein
   AT746_06345
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW AAA_22 Zeta_toxin CbiA AAA_30 AAA_31 AAA_16 YqeC ABC_tran VirC1 T2SSE AAA_33 AAA_19 ATP_bind_1 AAA_24 AAA_14 Fe-ADH_2
Other DBs
NCBI-ProteinID: ALS97923
UniProt: A0A0U2Z4R9
LinkDB
Position
1399345..1400727
AA seq 460 aa
MFENLSERLGKTLKNISGRGRLTEDNIKDTLREVRMALLEADVALPVVREFIGQVKEKAV
GIEVSKSLNPGQVFIKIVQSELEAIMGQANEKLDLSSKPPAVVMVAGLQGAGKTTSIGKL
ARFLREREKKKVLVVSADIYRPAAIKQLETLASEVQVGFHPSSVDQNPVDIVEGAIEQAR
KQFYDVLLVDTAGRLHVDDKMMGEIKALHQAIQPIETLFVVDAMTGQDAANTAQAFNDAL
PLTGVILTKADGDARGGAALSVRHITGKPIKFLGMGEKSDALEPFHPDRVASRILGMGDV
LSLVEEIERKVDKDKAQKLAKKVQKGKGFDLQDFKEQLEQMRNMGGMMSLVDKMPGMGNM
SAQIKDKANDKSFNQMEAIINSMTPGERQRPEIIKGSRKRRIASGSGTQIQDVNRLLKQF
TQMQKMMKKMSGGGMGKMMKRMKGMMPPGGPGGPGGMFPR
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgtttgagaatctgagcgaacgattaggtaaaacccttaaaaatatcagcggccggggc
aggttaaccgaagataatatcaaggataccctgcgtgaggtcagaatggccttgctggaa
gccgatgtggccttgccggtggtacgggaatttatcggccaggttaaggaaaaggccgtc
ggtattgaggtcagcaaaagccttaatcccggtcaggtgtttatcaagattgttcagtca
gagcttgaggccattatgggccaggcgaatgagaaactggacctgtcttcgaagccgccg
gcggtggtgatggtggcgggcctgcaaggtgccggtaaaaccaccagtatcggtaagctg
gccagatttttacgggagcgggaaaagaaaaaggtactggtggtcagcgccgatatttac
cgcccggcggcgatcaaacaacttgaaaccctggcctctgaagttcaggtgggtttccat
ccctccagtgtcgaccagaacccggttgatattgtagagggcgccatcgagcaggcacgt
aaacagttctacgatgtgttattggtggataccgccggccgtttgcacgttgatgacaag
atgatgggcgagatcaaggccctgcatcaggccattcagccgattgaaaccctgtttgtg
gtggacgccatgacaggtcaggatgccgccaataccgcacaggcttttaatgatgcactg
ccactgacaggtgtgatcctgaccaaggccgacggcgatgccagaggtggtgctgcgctc
tctgtgcgtcatattaccggcaagccgataaaattcttaggcatgggagaaaaatccgat
gcccttgagcctttccatccggatcgtgttgcctcccgtattctgggcatgggcgatgta
ctcagcctggtggaggagattgagcgcaaggttgataaagataaggctcagaaactggcc
aaaaaggtccagaagggcaaaggttttgacctgcaggattttaaagagcagcttgaacag
atgcgcaacatgggcggtatgatgtcgctggtggacaagatgccgggcatgggcaatatg
tcggcacagattaaagacaaggctaatgacaagtcctttaatcagatggaagccatcatt
aactctatgacgcccggtgaacgccagcgcccggaaattattaagggctcaagaaaacgc
cgcattgcttcgggttcgggtacgcagattcaggatgtgaaccggctgcttaagcaattt
acccagatgcagaaaatgatgaagaagatgtctggcggtggcatgggcaagatgatgaaa
cgtatgaaaggcatgatgcccccaggtggtccaggcggcccgggcggtatgtttccgcgc
tga

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