Lacimicrobium alkaliphilum: AT746_07675
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Entry
AT746_07675 CDS
T04189
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
lal
Lacimicrobium alkaliphilum
Brite
KEGG Orthology (KO) [BR:
lal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lal03016
]
AT746_07675
Enzymes [BR:
lal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AT746_07675
Transfer RNA biogenesis [BR:
lal03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AT746_07675
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
ALS98149
UniProt:
A0A0U3B906
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All DBs
Position
1686576..1687712
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AA seq
378 aa
AA seq
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MQYQLIEKDQELADYCRQASQQPFVAVDTEFVRTRTLYPRLGLVQLYDGQQLALVDPVAI
SDLSPLKNLLTDEGIIKVLHACSEDLETFASALGVMPTRVFDTQVAAAMLNMGPSLGYAR
LVEEMSGVTLDKGESRTDWLARPLSPQQLHYAANDVLYLFDLYPQLAEQIEQQQKTAWVF
AEVLQLIAKKQAELPLEYAYLTVKNNWQLKGRALAVLKELASWRLQTARKRDIALNFVLK
EQAMLELARRQPGSKNALHGISDLMPQDIRRHGDSLLEVISQALALPPEHYPARVERLVE
FPAYKKTSKALRDMCEKVALQNGLPIEMLGSKKQLNQLLKWLWFELDESKLMGLKPDLIS
GWREPLLKEGIERILPAC
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatcagttaatcgaaaaagatcaggagctggcggactattgccgtcaggcctca
cagcaaccctttgtcgccgtggatacagaatttgtgcgcacccgcaccctgtaccccaga
ctcggcctggttcagctctatgatggtcagcaactggcgctggtggatccggtggccatc
agtgatctctcaccactgaaaaatctgctcaccgatgagggcatcattaaggtgttgcat
gcctgctcggaggatctggaaacttttgcatcagctctgggagtgatgccaacaagggtt
tttgatactcaggtggccgcagccatgctgaatatggggccttcgctgggctatgccagg
ctggtagaagaaatgtcaggcgttacgctggataaaggtgagtcacgtaccgattggtta
gctcgccccttaagcccccaacaactgcattatgctgccaacgatgtgctgtatttattt
gatctttatccgcaactggcagagcaaattgaacagcaacaaaaaacggcctgggtgttt
gccgaagtattacaactcattgctaaaaaacaggccgaattaccgctggaatacgcttat
ctgacagtaaagaataactggcaacttaagggccgggcactggcggtactcaaggagttg
gcgagctggcgattacaaacggccagaaaacgggatattgcccttaactttgtgcttaag
gaacaggcaatgctggaactggcaaggcgtcagcctggttcgaagaatgccctgcacggg
attagcgatctgatgcctcaggatattcgccgtcatggcgatagtttgcttgaggtcatc
agccaggcactggcattgccgccggagcattacccggcgagagtcgagaggctggtggaa
tttccggcttataagaaaacctccaaagccctgagggatatgtgcgagaaggttgcgctg
caaaatggtttgccgattgagatgttagggtcaaaaaaacagctcaatcaattactcaaa
tggctgtggtttgaactcgatgagagtaaactaatgggtctgaaaccggatcttatcagc
ggttggcgtgaacccttgctaaaagaaggcattgagcggattttaccagcctgctga
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