Lacimicrobium alkaliphilum: AT746_18755
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Entry
AT746_18755 CDS
T04189
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lal
Lacimicrobium alkaliphilum
Pathway
lal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AT746_18755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lal03400
]
AT746_18755
Enzymes [BR:
lal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AT746_18755
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AT746_18755
DNA repair and recombination proteins [BR:
lal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AT746_18755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ALT00107
UniProt:
A0A0U2RRU8
LinkDB
All DBs
Position
complement(4210734..4211546)
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVEVSRLGISPLMIGQQISRITVRQPKLRWPVPQAIHQAEGYQILNIRRRAKYLL
LDTEPGSIILHLGMSGKLRVLALNAPLQKHDHLIIALDNQHSLRLNDPRRFGACLWQGRD
EPTLPLLTRLGPEPLTSDFDGERLYRLSRGRKQAVKNFIMDNAIVVGVGNIYANESLFLA
GIDPRRQAGRVGQDKYQQLAEAIKQVLIGAIEQGGTTLKDFAQADGNPGYFAQQLRVYGR
SGQACMVCETPVRAVVIGQRNSFYCSQCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactcccggaagttgaagtcagcaggctgggtatcagtccgctgatgattgga
cagcagattagccgtattactgtgcgtcagccaaagttgcgctggccagtgccgcaagcg
atccatcaggcagaaggttatcagatactaaatatccggcggcgggccaaatatctgctg
ctggatacggagccgggcagtatcattctgcatcttggaatgtccggtaaactgagagtt
ttagcccttaatgcaccattgcagaaacatgatcatctgattattgcactggataatcag
cattcactgcgcctgaatgatcccagacgctttggtgcctgtctctggcagggtcgtgat
gagccaactttgccactgttaacacgtttgggcccggaacctttaacatctgattttgat
ggcgagcggctataccggctgtcgcggggaaggaaacaggcggttaagaacttcattatg
gataatgccattgtggtgggtgtgggtaacatttatgccaatgaatcactgtttctggcc
ggtattgacccaagacgacaggccggccgggtcggccaggataaatatcagcagctggct
gaggcaataaaacaggttttaattggggccatagagcaaggtggcacaacactgaaggac
tttgcccaggctgacggtaacccgggctattttgcccagcaactcagagtgtacggcagg
tcggggcaagcgtgcatggtctgtgaaacgcctgtcagggctgtggtgattggacagcgc
aacagcttctattgcagccaatgtcagcggtaa
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