Lacimicrobium alkaliphilum: AT746_19025
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Entry
AT746_19025 CDS
T04189
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
lal
Lacimicrobium alkaliphilum
Brite
KEGG Orthology (KO) [BR:
lal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lal03016
]
AT746_19025 (trmE)
Transfer RNA biogenesis [BR:
lal03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
AT746_19025 (trmE)
Prokaryotic type
Methyltransferases
AT746_19025 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Ras
RsgA_GTPase
AIG1
ABC_tran
Roc
Gtr1_RagA
Arf
AAA_28
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ALT00562
UniProt:
A0A0U3AP17
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All DBs
Position
4266593..4267957
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AA seq
454 aa
AA seq
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MVQQQTIVAQATAPGRGGVGIVRVSGSRAAEVAEKLLGTLPPVRKAEYLPFYDLKGNIID
QGIALFFRGPNSFTGENVLELQGHGGQVVMDMLISAIVNIDDIRLARPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSALRSLQGEFSSQIHTLVEQVIHLRIYVEAAIDFPDEE
VDFLSDGKVQGDLEAIINQLQQVQDQARQGSILREGMQVVIAGRPNAGKSSLLNALAGRD
AAIVTDIAGTTRDVLKEHIHIDGMPLHIIDTAGLRDSPDKVEQIGIQRAWDEINRADMVL
FMLDSQQSLETDPHKIWPEFVDRLPERIRMTVIRNKIDLSGETAGVEKLADHTVIRLSAS
HKTGIELLAAHLKDAMGFNAAPEGRFIARRRHLDALEQALAHLQQGHSQLLDNQAGELLA
EELRLCQQHLNEITGEFSSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcaacaaaccattgtcgctcaggctaccgcacccggccgcggtggtgtggga
atcgtcagagtatccggcagtcgggcggcagaggtagcagaaaagctgctgggaaccctg
ccaccggtacgcaaagccgaatatctgcctttttatgatcttaagggaaatatcatcgat
cagggtatcgcgttgtttttccgcggaccaaattcttttaccggagaaaatgtactggag
ttgcagggccatggtgggcaagtggtcatggatatgctgatcagcgccattgtaaatatt
gatgacattcgtcttgcccggccaggcgagttcagcgaacgggcttttctgaatgacaaa
ctggatctggcacaggcagaagccattgccgatctgatcgacgccagttcagagcaggcc
gcccgctctgcccttcgctcattacagggcgaattctccagtcagatacatacactggta
gaacaggttatccatctgcgcatctatgtggaagccgccatagatttccccgatgaggaa
gtcgactttctcagcgatggtaaagtacagggcgatctggaagccatcataaaccagttg
caacaggtacaggatcaggcccgccagggcagtattctgcgcgaaggcatgcaggtggtg
attgccggtcgccccaatgccggcaaatccagtctgctcaatgcgttagccggaagagac
gcagccattgtcaccgatattgctggtaccacccgcgatgtactcaaagaacatattcat
atcgacggcatgccgttgcacatcatcgacaccgctggcctgcgcgacagcccagacaaa
gtggaacaaataggtattcagcgtgcatgggatgaaatcaaccgtgccgatatggtgtta
tttatgctcgactctcagcagagtctggagacagacccccacaagatctggccggaattt
gttgatcgtctgcccgaacgcatcagaatgacagtgatccgcaataaaattgatctctcc
ggggaaacagcgggggtagaaaaactcgccgatcataccgtcattcgcctctctgccagc
cacaaaaccggcatcgaattgctcgccgcgcatcttaaagatgccatgggctttaatgct
gcaccagagggccggtttattgcccgcaggcgtcatctggatgctcttgaacaagcctta
gctcatctgcagcagggtcactcacagttactcgacaatcaggccggagagctgctggct
gaagaattacgattgtgtcagcaacacttaaatgagatcaccggtgaattcagctccgat
gatttattgggcagaattttctccagtttttgtatcggtaagtaa
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