Lacimicrobium alkaliphilum: AT746_19360
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Entry
AT746_19360 CDS
T04189
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lal
Lacimicrobium alkaliphilum
Pathway
lal03420
Nucleotide excision repair
lal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AT746_19360 (uvrD)
03430 Mismatch repair
AT746_19360 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lal03400
]
AT746_19360 (uvrD)
Enzymes [BR:
lal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AT746_19360 (uvrD)
DNA repair and recombination proteins [BR:
lal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AT746_19360 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AT746_19360 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ALT00211
UniProt:
A0A0U3AQR5
LinkDB
All DBs
Position
complement(4326904..4329075)
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AA seq
723 aa
AA seq
DB search
MDVSRLIDGLNDKQREAVAAPPGDMLVLAGAGSGKTRVLVHRMAWLMEVEGISPFGILAV
TFTNKAAREMRARVEKLMHSSLQGMWIGTFHGLAHRLLRTHYQEARLPENFQILDSDDQY
RLIRRVLKALNLDEKHWAPKHIQWYINGNKDEGLRAQHIETHGDPAQQRMKEIYQAYQDT
CDRSGLVDFAELLLRAHELWVNNPRILQHYQQRFRAVLVDEFQDTNNIQYAWLRLLASPN
NNMMIVGDDDQSIYGWRGANVDNIQHFLRDFDGAQTIRLEQNYRSTGKILKAANAVIENN
QSRLGKELWTDGVDGEPISLYAGFNDLDEARFIVAQIRQWHDKGGALSDCAVLYRNNAQS
RVLEEAMLHEGLAYRIYGGLRFFERQEIKDALGYLRMINQSLDDAAFERVVNTPSRGIGE
RTLEQIRETAKITEQSLWQASLQMLQEKKLSGRAANALQSFVDLIFKLQQECLELALDQQ
ADHVIKGSGLYAMYQAEKGEKAQARIENLEELVTACKQFELPEEADNMTPLSAFLAHASL
EAGESQADSHQDAVQMMTMHSAKGLEFPLVLIGGVEEGMFPSQMSAEEPGRLEEERRLCY
VGMTRAMEKLVITYAESRRLYGQEKYHTPSRFLREIPTDCIEEIRLRNTQVSRPVQNRFA
PVTSHSAFDSTGFSLGQRVVHPKFGEGTVLNYEGSGEHARVQVNFSEVGNKWLVLSYARL
TPA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatccagactcatcgacggccttaacgacaaacagcgcgaagcagtggccgcg
ccaccaggcgatatgctggtgctggccggggccggcagtggcaagacccgggtactggtg
catcgtatggcctggctgatggaagtggagggtatctccccctttggtattctggcggtc
acttttaccaataaagccgcccgggaaatgcgtgcgcgggtggaaaaactgatgcactcc
tccttgcagggcatgtggattggtacctttcatggcctggcgcaccggttgctgcgcact
cactatcaggaagcccggctgccggagaactttcagatcctggactctgacgatcagtac
cgcctgatccgccgggtactcaaggccctgaatctggatgaaaaacactgggcgccaaaa
catatccagtggtatatcaacggtaacaaagatgaaggcctgcgggcacaacatattgaa
acccatggcgatccggcccagcagcgcatgaaagaaatttatcaggcctatcaggacacc
tgtgaccgttccgggctggtggattttgccgagctgttattaagagcccacgagctgtgg
gtcaataacccgcgtattctgcagcattatcagcaacgttttcgcgcggtactggtggat
gaatttcaggacaccaataatatccagtatgcctggttgcggctgctggccagccccaat
aacaatatgatgattgtgggtgacgatgatcagtctatttacggctggcgcggcgccaat
gtagacaatatccagcactttttacgagatttcgatggtgcccagaccatccgtctggag
cagaactaccgctccaccggcaaaatccttaaagccgccaatgcggtgattgagaataac
cagagccggttaggtaaagagctgtggacagacggcgtggatggcgagcccatctcttta
tatgccggttttaatgatctcgatgaagcccgctttattgtcgcccagattcgccagtgg
catgacaagggcggcgccctgtctgactgcgccgtgctataccgcaataatgcccagtca
cgggtattggaagaggccatgctgcacgaaggcctggcctatcggatttacggcggcctg
aggttcttcgagcgccaggaaatcaaagatgcactgggctatctgagaatgataaaccag
tcgctggacgatgccgcctttgaacgggtggtaaatacacccagccgtggtattggcgag
cgtacccttgagcaaatccgggaaaccgccaaaatcaccgagcagtccttatggcaggcg
tcgctgcagatgctacaggagaaaaagctctcaggccgtgccgccaatgcgctgcaatcc
tttgtggatctgatctttaaactgcaacaggagtgcctggagctggcgctggatcagcag
gccgaccatgtgattaaaggctcaggcctgtacgccatgtatcaggccgaaaaaggcgag
aaagcccaggcacgaattgaaaacctcgaagaacttgtgaccgcctgcaaacagtttgaa
ctgccagaggaagctgacaatatgacgcccttatcggcgtttctggcccatgcgtcactg
gaagcgggagagtctcaggccgacagtcatcaggatgccgtacagatgatgaccatgcac
agcgccaaaggcctggaattcccgctggtattgattggcggagtggaagagggcatgttc
cccagtcagatgagcgccgaagaaccgggccggctcgaagaagagcgtcgtctctgttac
gttggtatgacacgcgccatggagaagttagtcatcacttacgctgaaagcagaagactc
tatgggcaggaaaaataccatacgccatcacgttttttgcgcgaaatacctaccgattgc
attgaggagatccgcctgcgcaatactcaggtgtcacggccggtgcagaatcgctttgct
ccggtgacctcgcactctgcctttgattccaccgggttctctctgggtcagcgggttgtt
catcccaagtttggtgagggcacggtacttaactatgaaggctcgggagagcatgccaga
gtacaggtgaatttcagcgaggtgggcaataaatggctggtattaagctatgccagactg
acgccggcataa
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