Leptotrichia alba: AB8B28_02480
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Entry
AB8B28_02480 CDS
T10903
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
lala Leptotrichia alba
Brite
KEGG Orthology (KO) [BR:
lala00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AB8B28_02480 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lala03021
]
AB8B28_02480 (rpoD)
Transcription machinery [BR:
lala03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AB8B28_02480 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
RPA_C
SieB
Motif
Other DBs
NCBI-ProteinID:
XDU62747
UniProt:
A0AB39V613
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All DBs
Position
complement(459048..460226)
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AA seq
392 aa
AA seq
DB search
MSDKKQNLKNSLANFIKQAREQKVVSYEEINSVLSIGFSTEKIEQLIKKLTDDGVQIVDT
KKEKDDLLKVPDSLEDIEKMEISDFEDSHDEFVESEIDDSEVDKLLQTDLLKMAESMDVD
EPIKMYLREIGQIPLLSYEEEIDYAQRVLNGEEEAKQKLIESNLRLVVSIAKKHTNRGLK
MLDLIQEGNMGLMKAVEKFEYEKGFKFSTYATWWIRQAITRAIADQGRTIRIPVHMIETI
NKIKKESRIILQETGKEPTAEELAEKLELPVEKVKSILEMNQDPISLETPVGSEEDSELG
DFVEDDKFANPYDATTRILLKEQLDEVLKTLNEREEMVLRYRYGLDDGSQKTLEEVGKIF
NVTRERIRQIEVKALRKLRHPSRRKKLEDYRS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataaaaaacaaaatttaaaaaatagtctcgcaaattttataaaacaggcacga
gagcaaaaagttgtaagttacgaagaaataaattctgttttgtctattggattttcaact
gagaaaattgagcagttaataaaaaaattgactgatgacggtgttcaaattgtagataca
aagaaagaaaaagatgacttgttaaaagttcctgattctttagaggacattgaaaaaatg
gaaatatcagattttgaagattctcatgacgaatttgtagagagtgaaatcgatgattcg
gaagtggataaattactacagacagatctgttgaaaatggcagaaagtatggatgtggat
gaaccaataaagatgtacctgcgtgaaatcggacaaatcccattacttagctatgaagag
gaaattgactatgctcaaagggttttgaacggcgaagaggaagcaaagcaaaaattaatt
gaatcaaacttaaggcttgttgtcagtattgccaaaaaacatacaaatcgtggattaaaa
atgctggatttaattcaagagggaaatatggggcttatgaaggctgtagaaaaatttgaa
tatgaaaaaggatttaaattttcaacttatgcaacatggtggattagacaggcgataaca
cgtgcgattgcagatcaaggaagaacaataagaatacctgttcacatgattgaaacgatt
aacaaaattaaaaaagaaagccgaattattttacaggaaactggaaaagagccaacagcg
gaagagttggctgaaaaactggaattaccagtagaaaaggtaaaaagtattcttgaaatg
aatcaggacccaatttctttagaaacaccagttggaagtgaagaagacagtgaactggga
gattttgttgaagatgacaaatttgcaaatccgtatgatgcgacaacaaggattttatta
aaggaacagcttgacgaagtattaaaaacattgaatgagcgtgaggagatggtactcaga
tatagatatggacttgatgatggttctcaaaagactttggaagaagtaggaaaaattttt
aacgtgacaagagaacgtatcagacagattgaggtaaaagcgttaagaaaattaagacat
ccgagtagaagaaaaaaattggaagattacaggagctaa
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