Leptotrichia alba: AB8B28_02500
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Entry
AB8B28_02500 CDS
T10903
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lala Leptotrichia alba
Pathway
lala03020
RNA polymerase
Brite
Enzymes [BR:
lala01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AB8B28_02500 (rpoC)
Transcription machinery [BR:
lala03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AB8B28_02500 (rpoC)
DNA repair and recombination proteins [BR:
lala03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AB8B28_02500 (rpoC)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XDU62751
UniProt:
A0AB39V4R0
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All DBs
Position
complement(463192..467265)
Genome browser
AA seq
1357 aa
AA seq
DB search
MSIRDFDSIQIKLASPEKILEWSYGEITKAETINYRTLKPEMDGLFCERIFGPSKDYECA
CGKYKRMRYKGMVCEKCGVEVTTSKVRRERMGHIKLATPIAHIWYSKGTPNKMSLLLGIS
TKELESVLYFSRYIVTDPGETGLQKGEILTERQYKLHENQFKNEFTAKMGAEGVLALLEE
IDLLELEKKLQNEMDTEHSTQKRRKVIKRLKIVRDLIEAGNRPEWMIMTVLPVIPADLRP
MVQLDGGRFATSDLNDLYRRVINRNIRLKKLMSIKAPEIVIKNEKRMLQEAVDALIDNGR
RGKPVVTQNNRELKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPSLKMNQCGLPKK
MALELYKPFLMRELVKRELASNIKVAKKMVEEEDENVWELIEEIIKNHPVLLNRAPTLHR
LSIQAFEPILIEGKAIRLHPLVCSAFNADFDGDQMAVHLVLSQEAQMEAKLLMLATNNII
APSSGRPIAVPSQDMVMGCYYMTKERKGVKGEGKSFSNKNQLITAYQNGQVAVHALVNVR
IDGQIIQTTPGRLMFNTMLPKEVRDYTKTFGKGELGKLIAELYKRFGFEKTSALLDKIKE
FGFHYGTLAGITVGIEDLEIPESKKSILEKAENEVAKIEEQYKAGEIIDAERYRRTVAIW
DEAVSKVTKDMMDNLDEFNPVYMMANSGARGSIAQMRQLGGMRGLMADTQGRIIEMPIKA
NFREGLNILEFFMSSHGARKGLADTALRTADSGYLTRRLVDISHEVIVNHDDCGCEHGIV
VSDLMDAGEVIEKLSERIYGRNLATDLIHNGEVIAERNTLITDDLIKKIEELDIREVEIR
TPLTCKLEKGVCKKCYGLDLSNHKEILKGEAVGVIAAQSIGEPGTQLTMRTFHTGGVATA
ASVQSDYKADISGKVKFRDISTLVNEEGKEIVVSQNGRVIIGKHRYEVPSGSTLHVKDGD
TIEKGQVLVEFDPYQIPIITSEEGKVEFRDIYVRENIDVKYGVTEKVAIKPVESNDVNPR
IIIYTKDNRRVEYAVPYGAYLMVSEGDTVKKGQVITKILKTGEGNKDITGGLPRVQELFE
ARNPKGKATLSEVAGRVVFSDKKKKGMRLILIEDPETGELIQEYTVPVGEHLVVTNEMLI
EKGAKITDGPVSPHDILKIKGLVEAQQFILESVQQVYREQGVAVNDKHIEIIVKQMFQKI
KIKEAGDSLFLEDELIDKKIVERENEMLISKGKRPATYDSVIQGITKAAVNTESFISASS
FQETTKVLANAAVEGKTDRLEGLKENVIIGKKIPGGTGFKDYKYLDATLKSDIVEEENSE
IKYETSEEKIEINEAVKTVSHISDEIEENVEETVEIK
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgagtataagagattttgacagtattcaaataaaattggcatcgccagaaaagattttg
gaatggtcgtatggtgaaataacaaaagccgaaacaataaattatagaacattaaagcct
gaaatggacgggttattctgtgagagaatatttggaccgtctaaggactatgagtgtgcc
tgcgggaagtataagagaatgcgttataaaggcatggtgtgtgaaaaatgtggtgttgaa
gtgacaacttcaaaagttagacgtgaaagaatgggacatattaaacttgctacaccgatt
gcacatatctggtattctaaaggtacgcctaataaaatgagccttttattgggaatcagt
acaaaggaattggagtcagttctgtatttttcaagatacattgtgactgatccaggagaa
actgggcttcaaaaaggagaaatcctgacagagcggcaatataaactgcatgaaaatcaa
tttaaaaacgaatttacagcaaaaatgggagctgaaggagttttagccttacttgaggaa
attgatttgcttgaattagaaaaaaaacttcaaaatgaaatggatacagaacattctact
caaaaaagaagaaaagttataaaaagattaaaaatagtaagagatttgatagaagctgga
aatagaccagaatggatgattatgactgtacttcctgtaattcctgcggatttacgtcca
atggttcaattagatggtggaagatttgctacttctgacttgaatgacttgtatagaaga
gtgattaacagaaatatcagacttaaaaaattgatgtcaataaaagctcctgaaattgtg
attaaaaatgaaaaaagaatgttgcaggaagctgtggatgcattaattgacaatggtaga
cgtggaaaaccagttgttactcaaaataacagggaattaaaatcgctttctgatatgcta
aaaggtaaacaagggcgttttagacaaaatcttttgggaaaacgtgtggattattcagga
agatcggttattgtcgttggaccaagtttaaaaatgaatcaatgtggtcttcctaaaaag
atggcacttgagctgtataaaccgtttttgatgagagagcttgtaaaaagggaattagct
tcaaatattaaagtggctaagaagatggtggaagaagaagatgaaaatgtatgggaatta
attgaagaaattattaaaaatcaccctgttcttttaaaccgtgctccaacattgcataga
ctttcaattcaggcatttgagccaatcttgatagaaggaaaggcaataagacttcatccg
cttgtatgttctgcatttaatgcggattttgatggggatcaaatggcagtacacttggta
ttgtcacaggaagcgcaaatggaagcaaaattattaatgcttgcaacaaataacattatc
gcaccgtcaagtggtagaccgatagcagttccatcacaagatatggtaatgggatgttat
tacatgacaaaggaaagaaaaggtgtaaaaggagaagggaaatctttttctaacaaaaat
caattaattacagcttatcaaaatggacaagttgcagttcacgcacttgtaaatgtaaga
attgatggacaaataattcaaactacaccaggtcgtcttatgtttaacacaatgcttcca
aaagaagtgagagattatactaagacatttggtaaaggtgaattaggaaaattaattgct
gagttgtacaaaagatttggatttgaaaaaacatcggcattattggataaaattaaggaa
tttggattccattatggaacgcttgctggaattactgttggaattgaagatctggaaatt
cctgaaagtaaaaaatctattcttgaaaaagctgaaaatgaagtggctaaaattgaagaa
caatataaagctggagaaatcattgatgcagaaagatacagaagaacggttgcaatttgg
gatgaggcagtttcaaaggtaactaaggatatgatggacaacttggatgaatttaatcca
gtttacatgatggcgaactctggagccagaggttcgattgcgcaaatgcgtcaacttggt
ggaatgcgtggacttatggcagatacgcaaggacgtattatagaaatgccgattaaagcc
aactttagggaagggcttaacattcttgagttctttatgtcttcacatggagcgagaaaa
ggacttgccgatacagcattaagaacggcggattcaggatatttgacaagaaggcttgtt
gatatttcacacgaagttattgtaaatcatgatgactgcggatgtgagcatggaattgta
gtatcagacttgatggatgcaggggaagttattgaaaaattaagtgaaagaatttacgga
agaaacttagcgacagacttgattcacaatggagaagttattgctgagagaaatactttg
attactgatgacttgattaagaaaattgaagagctggatattcgtgaagttgaaataaga
acgcctttgacttgtaaattggaaaaaggagtttgtaaaaaatgttacggactagatctt
tctaatcacaaagaaattcttaaaggggaagcagttggagttattgcagctcaatcaatt
ggagagcctggtacacagcttacaatgcgtactttccatactggaggggtagcaactgcg
gcatctgttcagtcagattacaaggctgatatttctggaaaagtcaaatttagagatatt
tcgacacttgtaaatgaagaaggaaaagaaatcgttgtttctcaaaatggacgtgtaatt
ataggcaaacatagatacgaagtgccctcaggttcgactttacatgtaaaagatggagat
acaattgagaaagggcaagttcttgtagaatttgatccttatcaaataccaattattaca
tctgaagaaggaaaagtggaatttagggatatttacgtaagagaaaatattgacgtaaaa
tatggagtcactgaaaaagttgcgataaaacctgtcgaaagtaacgatgtaaatcctaga
attatcatttatacaaaagataatagaagagttgaatatgcagttccatatggagcatat
ttgatggtgagtgaaggagatacagttaaaaaagggcaagttattactaaaattttgaaa
actggagaaggaaacaaggatattactggaggtcttcctagggtacaagaattatttgaa
gcaagaaatccaaaaggaaaagctacattatcagaagttgcaggacgtgtggttttctct
gacaaaaagaaaaaaggtatgagattaatcttaattgaagatcctgaaactggtgaatta
attcaagaatatacagttccagtgggagaacatttggttgtaactaatgaaatgctgatt
gaaaaaggcgctaaaattactgacgggcctgtttcaccacatgatattctaaaaataaaa
gggcttgtagaagcacagcaatttattcttgagtcagtacagcaagtgtatagggagcag
ggagttgcagttaatgacaagcatattgaaataattgttaagcaaatgtttcaaaaaatc
aagattaaggaagcaggagattcattattccttgaagacgaattaattgacaagaaaatt
gtggaacgtgaaaatgaaatgttaatttcaaaaggaaaacggccagcaacatacgattcc
gtaattcagggtattacaaaagcggcagtaaatacggaaagtttcatttcagcatcatca
ttccaggaaacaacaaaagttcttgcaaatgcagctgttgaaggaaaaacagacagactt
gaaggattgaaggaaaatgtaattattggtaagaaaataccaggaggaactggatttaaa
gactataaatatctggatgcaactctaaagagcgatattgtggaagaagaaaattcagaa
ataaaatacgaaacaagtgaagaaaaaattgaaataaatgaagctgtgaaaacagttagt
catatttcagatgaaattgaagaaaatgttgaagaaacagtagaaattaaataa
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