Lagenorhynchus albirostris (white-beaked dolphin): 132504784
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Entry
132504784 CDS
T10760
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03430
Mismatch repair
lalb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
132504784 (PMS2)
03460 Fanconi anemia pathway
132504784 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lalb03400
]
132504784 (PMS2)
DNA repair and recombination proteins [BR:
lalb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
132504784 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
UfSP_MPN_N
Motif
Other DBs
NCBI-GeneID:
132504784
NCBI-ProteinID:
XP_059978394
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All DBs
Position
15:complement(82966949..82993473)
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AA seq
865 aa
AA seq
DB search
MEQADVPSSELAKAIKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDASATNIELRLKD
YGAELIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDV
TISTCHTSAKVGTRLVFDHNGKILQKTPYPRPRGTTVSVQQLFYTLPVRHKEFQRNIKKE
FSKMVQVLHAYCIISAGVRVSCTNQVGQGKRQPVVCTSGGSSMKENIGSVFGQKQLQSLI
PFVQLPPSDTVREEYGLSSSQALQNLFCISGFISHCAHGVGRSSTDRQFFFINRRPCDPA
KVSRLVNEIYHMYNRHQYPFVVLNISVDLECVDINVTPDKRQILLQEEKLLLAVLKTSLI
GMFDNDVNKLNVSQQPLFDVEGHSIKRHSAEVEKPMPEKQDDPAPLRTRGEEKRAVTISR
LREAFSLRHTVENKSRGPKATDPRRISPRQKSSTPLPSASRPLCSWKHISEPREEGVTST
QGPCDPMGRVDTEEGWGHSSTSAGSEEGSSTPKTSSQPSSEHVASSPKDGFSQENVESLE
KLPETDDRLLGTNCHLDHEESGSRARVSLQPTQLSSPNAKRFRKEGVPLNPDVPPESMKT
QNASALEVDVAVEINKKIVPLDFSMSSLAKRIKQLCQQEQQQEGGQNYRKFRAKICPGEN
QAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTV
LQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEGAPVTERAKLISLPTSKSWT
FGPQDIDELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNTSEMKKLITHMGEM
DHPWNCPHGRPTMRHIANLDIISQN
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagccgacgtgccgagttcagaacttgctaaggccatcaaacctatcgatcgg
aagtcagtccatcagatttgttctgggcaggtggttcttagtctaagcactgctgtgaag
gagttggtggaaaatagtgtggatgccagtgccactaacattgagctcaggcttaaagac
tatggggcggagctcattgaagtttcagacaatggatgcggggtagaagaagaaaacttt
gaaggcttaactctgaagcatcacacttctaagattcaggagtttgctgacctcactcag
gttgaaacttttggctttcggggggaagctctgagctcactctgtgcactgagtgatgta
actatttctacctgccacacatctgcgaaggttgggactcgactggtgtttgatcacaat
ggaaaaatcctccagaaaaccccctacccacgacccagagggacgacagtcagcgtgcag
cagttattttatacgttacctgtgcgccataaggagtttcaaaggaatattaaaaaggag
ttctccaaaatggtccaggtcttacacgcctactgtatcatttcagcgggcgtccgtgta
agttgcaccaatcaggttggacagggtaagaggcagcctgtggtgtgcaccagtggaggc
tccagcatgaaggaaaatatcggatctgtatttgggcagaaacagttgcaaagcctcatc
ccttttgtacagctgccccctagtgacactgtccgtgaagaatacgggctgagctcttcc
caggctctgcagaacctgttttgtatctcaggttttatttctcactgtgctcacggcgtg
ggaagaagttcaacggacagacagtttttctttatcaatcggcggccttgtgacccagca
aaggtttccagacttgtgaatgagatctatcacatgtataaccggcatcagtatccattt
gttgttcttaacatttctgttgatttggaatgtgtcgacatcaacgttactccagataaa
aggcaaattttactacaggaggagaagcttttgttggcagttttaaagacgtctttgata
ggaatgttcgataatgatgttaacaagctcaacgtcagtcagcagccgctgtttgacgtc
gaaggtcactcaataaaaaggcattcggcagaggtggagaagcccatgccagagaagcag
gatgatcccgccccattaaggactcgcggggaagagaaaagggcagtgaccatttccaga
ctgagagaggccttttcccttcgtcacacagtggagaacaagtctcggggtccgaaggcc
accgacccaagacggatttctccacgacagaaaagcagcaccccacttcctagcgcttca
aggcccctctgctcctggaagcacatctctgaacctcgggaggaaggggtgacttccact
caggggccctgtgacccgatgggcagagtggacacggaggagggctgggggcacagcagc
acatctgccggctctgaggaggggtccagcaccccaaaaacgagcagccagcccagcagt
gagcatgtggcaagctcccccaaagatgggttttcgcaagaaaatgtggagtctttggag
aagttacctgaaacggacgatcgtcttttgggcacgaattgccacttagaccacgaagaa
agcggctcccgagctagagtttcgctgcagccaactcagctctcatccccaaacgcaaag
cgttttagaaaagaaggggttcctttaaatcccgatgtccctccagagtccatgaaaact
cagaacgcttcagcgctggaggtggatgtagctgttgaaattaacaagaaaatagtgccc
cttgacttttctatgagctctttagccaaacgaataaagcagttatgtcagcaagaacag
caacaagaaggtggacaaaattataggaagtttcgggcaaagatttgccctggagaaaat
caagcagcagaagatgaactaagaaaagagataagcaaaacgatgtttgcagaaatggaa
atcattggtcagtttaacttgggatttatcatcaccaaactgaacgcagatattttcata
gtggaccagcatgccacggatgagaaatacaacttcgagatgcttcagcagcacactgtt
ctccagggtcaaaggcttatagcacctcagactctcaacttaacagctgtcaatgaagca
gttctaatagaaaatctggaaatattcagaaagaatggctttgactttgttatcgatgaa
ggcgcgccggtcactgaaagagctaaattgatttccttgccaactagtaaaagctggacc
tttggaccccaggacatagatgaactgatcttcatgctgagcgacagccccggtgtcatg
tgccggccttcccgggtcaggcagatgtttgcctccagggcctgtcggaagtctgtgatg
attggaactgctcttaacacaagtgagatgaagaaactcatcacccacatgggggagatg
gaccatccctggaactgtccccacggaaggcccaccatgagacacattgccaatctggac
atcatttctcaaaactga
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