Lagenorhynchus albirostris (white-beaked dolphin): 132505208
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Entry
132505208 CDS
T10760
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03440
Homologous recombination
lalb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132505208 (PALB2)
03460 Fanconi anemia pathway
132505208 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lalb03400
]
132505208 (PALB2)
DNA repair and recombination proteins [BR:
lalb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
132505208 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
132505208 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
132505208
NCBI-ProteinID:
XP_059979127
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Position
15:complement(67609291..67633407)
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AA seq
1204 aa
AA seq
DB search
MRGQLGAACLCLIGTASLLSDASFLPAQFCLVFFFFQLKEKLAFLKREYSKTLARLQRAQ
RAEKFKNSIKRTVEGQDSSLQQEVSTQLTDTEPKNKVSPCDTLQINTHVDKETGEKTPIT
LDLEPESFSPGRIPAEGSRIQRSDDIQEHFPYGVSGPDGKKRQSKLLGRRKKQERTFISQ
ERESFFDIDLLILSGKRLKEQEEINRENPKTPVTEIRTYPSSPKSDIPDSPAPVTGTNVG
SVLILPNAKPQRDVDALLRGNNFPRVTTLPLHVPSVSSSGQHLEHEPPKSNCELTTHSLE
NISPALPVNLETQNKKMTVFTDNPEVNKSISASDQPPRSPNLEAGNSCSINELTYDNLVA
NENQNLKEQNHTEMSFKSPNNALGGRNESRLEKEVPSQSKSLSLEVISPVSTENQTHSCT
VLEGLLFPAEYYVRTTRRMSDCQRKVALEAVIQSHLDVRKKGFKNKNKESAKKLNVSNEE
TNQSEIKMSDTYAEQPSSKSPQKLLSLTEVNSPAGPTKNDFSGKAVTQPSGRKRKGRRKS
VCTPLLDHHELLLPTSGTSGVNRSKEEVALHRDQNEKAIIHEKEGHCQKEDSLSYSNYVY
LSLDDDAFSSPVHKSETLNLKHLSPFLKITDFQLPDEDFGPLKLEKLKSCSEKLMEPFGS
KIYGEGHLKGGNCVAVEQLTPKQITIEKEDGKEERIILPGKAHPKMPNQKSQPQEKGLSS
SILLFTPVNTVASDDNDRRTAELCSPAFPVLGSTPAFGSQAHGEKVSAEVVGQACSTPQL
SHLKAAVSLASDHKQFWSSPPKLDSSLHVAGREGQPSRDCDSGPQATALPIESSTYKENQ
LRGNTCQELRKHSTEQTEIADVPACDSLNPGTLQLVSKLKNPSGSCSVDVSAMWWEIAGF
KERCIITACEYVVSLWKPLDTWQWEKIYSWHFAEVPVLQIVLVPDVCNLVCVALGNLEIR
EIRALLCSPDGKSEKQVLLSSGNIKAVLGLTKRRLVSSSGTLCDQQVEIMTFAEDGGSKE
KQFLMHPEETILTFAEVQGMQEALLGTTVMNNIVIWNLKTGQLLKKMHIGDSYQASVCHK
AYSEMGLLFVVLSHPCAKESKLLGSPVFQLIVINPKTTLSVGVMLYCLPQGQAGRFLEGD
VKDHFAAAVLTSGTIAIWDLLLGHCTALLPPVSDQNWSFVKWSGADSHLLAGQKDGNIFV
YRYY
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgaggggccagctgggcgccgcatgcttgtgtctgataggcactgcatcccttctctct
gatgcctcctttctacctgctcagttttgtttggtgtttttcttcttccagttgaaggaa
aaattagcattcttgaaaagggaatacagcaagacactggcccgccttcagcgtgcccag
agagctgagaagtttaagaattccattaagagaacagtagaaggacaagattcctcgctc
cagcaggaagtttcaacgcagctaactgacacagaacctaaaaataaagtatctccttgt
gacacgttgcaaatcaacacccacgtcgataaagaaactggagaaaagacacctatcaca
cttgaccttgagcctgagtcctttagccctggacgaatcccagcagaaggatcacgcata
caaagatcagacgatatccaagaacattttccgtacggggtcagtggccctgatggtaag
aaaaggcagagtaagctgctagggagaagaaagaaacaggagagaacatttatttcacag
gagagagagtctttctttgacattgatttgctcatactctctggaaaaagactaaaggaa
caggaagaaatcaatagagaaaatcctaagacacctgtaactgagataagaacttacccg
tcaagtcctaagtctgacattcccgattctccagcaccagttacaggaactaatgtaggg
agtgtattaattctgccaaacgccaaaccgcagagagatgttgatgcactcttaagagga
aataatttccccagggtgactactcttcctttgcatgttccatcagtcagcagtagtggt
cagcacctcgagcatgagcctcctaaaagtaactgtgaactcactactcacagtttagaa
aacattagccctgctttgcctgtaaacttagagacacaaaacaaaaaaatgactgtcttt
acagataacccagaggtaaacaaaagtataagtgcaagtgaccagccgcctagaagtcct
aacttggaggcaggtaattcatgttctataaatgaactcacctatgataacttagtggca
aatgaaaaccaaaacttaaaagaacaaaatcacacagagatgtcttttaaatctcccaat
aatgctcttggtggtagaaacgaaagtcgtctggaaaaagaagttccaagtcagtctaag
agtcttagcctagaagtaatttctcccgtttctacagaaaatcaaacacattcttgcaca
gtgcttgaaggccttctatttcctgcagagtattatgtcagaacaacacgacgcatgtca
gattgccagaggaaagtagccctggaggctgtaatacaaagtcatttggatgtcagaaaa
aagggctttaaaaataaaaataaggaatctgctaaaaagttaaacgtttccaatgaagaa
actaaccaaagtgaaattaagatgtcggacacgtacgcagaacaaccaagttcaaaaagt
cctcagaaacttctctcgttaactgaggtcaactctcccgctggccccactaaaaatgac
ttttctgggaaggcggttacccagccatctggtagaaaacgcaaaggaagaagaaagtca
gtctgcacccctctgttagatcaccatgaactacttttgccaacttctggcacatcaggt
gttaataggtccaaggaagaagttgccttgcacagagatcagaatgaaaaagcaattatt
cacgagaaggaaggtcattgtcaaaaagaggactccctttcttacagtaattacgtgtat
ttatctttggatgatgatgctttcagttctccagttcataagagtgaaacgctaaattta
aagcatctgtcgccttttctcaaaatcacagacttccagttacctgatgaagactttggg
cctcttaagcttgaaaaactgaagtcttgctcagaaaagctgatggagccttttggatca
aaaatatatggagagggacatcttaaagggggaaattgtgttgctgtggagcaactgacc
cctaaacaaatcactatagagaaggaggatgggaaagaggaacggatcatcctgccagga
aaggcacatcctaaaatgccaaaccaaaaaagccagccgcaggagaaggggctttcttca
tccattttacttttcactcctgtaaatactgttgcatctgatgataatgacagacggaca
gcagagctatgctcacccgctttccccgtcttaggctctactccagcttttggctcccaa
gcccatggagaaaaggtgtctgcagaggttgttggacaagcttgctctacaccccagctt
tctcacttaaaagccgcagtcagccttgctagtgaccataaacaattttggagcagccca
ccaaaattggatagcagcctgcatgtggcaggaagggaaggacagccttcccgtgactgt
gactctggtccgcaagcaacagctctacccattgagtcatcaacctacaaagaaaatcag
ctccgtggaaacacgtgccaggaattacggaaacattccactgaacagactgaaatagca
gacgttcctgcttgtgatagcttaaacccaggcaccctacaattggtttcaaagttaaag
aatccttcaggttcctgttctgtggatgtgagtgccatgtggtgggaaatagctggtttc
aaagaacggtgtatcataactgcttgtgaatacgtagtttctctttggaaacctctggat
acttggcagtgggaaaaaatttattcctggcacttcgcagaggtcccagtattacagata
gttctagtgcctgatgtttgtaatcttgtgtgtgtggctttgggaaacttggaaatcaga
gaaatcagggcactactttgttctcctgatggtaaaagtgaaaagcaagtgctcctgagt
tctggaaatataaaagctgtgcttggcctgacaaagaggaggctagtcagtagcagtggg
accctttgtgatcaacaagtagaaatcatgacgtttgcagaagatggaggaagcaaagaa
aaacagtttttgatgcaccctgaagagactatactaacttttgctgaggttcaagggatg
caggaagctctgcttggtaccactgtaatgaacaacattgttatttggaatttaaaaact
ggtcaactcctgaaaaagatgcacattggtgattcctaccaagcttcagtctgtcacaaa
gcttattctgaaatggggctcctgtttgttgttctgagtcacccttgtgccaaagagagc
aagttgttgggaagccctgtgtttcagctgattgtgattaacccaaagacgaccctgagt
gtgggcgtgatgctctactgccttcctcaagggcaggctggaaggttcctggaaggtgac
gtgaaagatcattttgcagcagcagtattaacttctggaaccattgccatttgggactta
ctcctaggtcattgcactgctctccttccacctgtctctgaccagaactggtcttttgtt
aaatggtcgggtgcagattctcatttgctggctggacaaaaagatggaaatatatttgta
taccgctactactga
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