Lagenorhynchus albirostris (white-beaked dolphin): 132505383
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Entry
132505383 CDS
T10760
Symbol
IFT140
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
KO
K19672
intraflagellar transport protein 140
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lalb03037
]
132505383 (IFT140)
Cilium and associated proteins [BR:
lalb03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
132505383 (IFT140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_Prp19
TPR_IFT80_172
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WDR55
TPR_COPA_B
WD40
TPR_GEMI5
Beta-prop_CAF1B_HIR1
Clathrin
tRNA_int_end_N2
TPR_12
WD40_MABP1-WDR62_1st
Consortin_N
Cytidylate_kin2
Motif
Other DBs
NCBI-GeneID:
132505383
NCBI-ProteinID:
XP_059979409
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All DBs
Position
15:complement(50565832..50636225)
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AA seq
1463 aa
AA seq
DB search
MALYFDHRIEAPDAVGSPSHISWHPVHPFLAVASISTASGGSVDIYREQGECVPDTHIER
SFRVTSLCWHPTRLILAIGWETGEVVVFNKQDKEQHVVPPTQTADITVLNWSPNGNCLVS
GDRLGILLLWKLDQRGRVQGAPLLKHEYGKHLTHCIFRLPPPGEDLVQLAKAAVSGDEKA
LDKFNWRKCGFGSFLKMGPQEGLSFFVSLTDGTVHYVDEKGRTARVASTDSSIQTLFYLE
EREVLVAVTESLLLCLFTVMPEGTAEEVMKVKLSGNMGRQANVALINSSLLVTATGEAVL
RFWDLERGENYVLSPEEKFGFEKGENMNCVSYCRVKGLLAAGTDKGRVAMWRKVPGPQSS
QGVEGKDRWTLQIPTELEGNITQIKWGSRKSLLAVNSISSVLILREQAMSSHFHQQVAAV
QVSPSLLSVSFLSTGVTHSLRTDMYISGVFATKDAVAVWNGKQVVIFEPSGATLRSAGTF
LCESPVLAMHEENVYTVEPNRVQVRTWQGTVKQLLPFSETEGNPCFFDICGNFLVVGTDL
AHFKSFDLSRREAKVHCSCKSLAGLVPGVGGMASLRCNASGSKISILLSKADNSPDSRIC
FYDVEMDTVTILDFKRGQIDQRETLSFNGQETKKSQALADERLTNLVPVSHFWDQSEPRL
FVCEALQEVPGAPLQPTDRKALGEASTGPTADVLVLSFFVSEEHGFLLQDSFLRPPVFQA
LLGIQVPHYYFMRKPGEVDLEDQVDSGSQRIPQTVGRRPLRDFVGLEDCDKPTQDAMLNF
TFFLAVGDMDEAFRSIKLIKSEAVWENMARMCVKTQRLDVAKVCLGHMGHARGARALREA
EQEPEPEARVAVLAIQLGMLEDAEHLYKKCGRYDLLNRLLQAEGQWQRAIEVAERHDRVH
LRTTYYNYARHLEASGDCSLALSYYEKSDTHRFEVPRMLAEDLQALELYINKMKDKTLWR
WWAQYLESQAEMDAALRYYELAHDYFSLVRVYCFQGNIQKAAEIASETGNWAASYHLARQ
YESQDEVRQAVHFYTRAQAFNNAIRLCKEHGLDDQLMNLALLSSPKDMIEAARYYEEKGE
QMDQAVMLYHKAGHFSKALELAFATQQFVALQLVAEDLDEKSDPALLARCSDFFLEHSQY
EKAVELLLAAKKYHEALQLCLEHNLTITEEMAEKMTVSKDCKELSEESRRELLEQIASCC
MRQGNYHLATKKYTQAGDRLKAMRALLKSGDTEKIVFFAGVSRQKEIYIMAANYLQSLDW
RKDPEIMKSIISFYTKGRALDLLAGFYDACAQVEIDEYQNYDKAHGALTEAYKCLSKAKA
RSPLDQEARLAQLQSKMALVKRFMQARRTYTEDPKESVRQCKLLLEEPDLDSTVRVGDVY
GFLVERHVQMEDLQTAYKYLEEMRKRVPSANVSYYVSQRTVDAVHQGLGIPLMCTMPEQM
RHNNMEDHKEMDEEVMEEVENGP
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atggccctctactttgaccaccgcatagaagccccagatgcagttgggtctccctcccac
atcagttggcaccccgttcacccattcctggcagtcgcttccattagcacagcctcagga
ggcagtgtggatatatatcgggagcaaggtgagtgcgtgccagacacgcatatcgagagg
tcgttccgggtcacctccctctgctggcacccgacgcggctgatcctggctattggctgg
gagaccggagaagtggtcgtgtttaataagcaagacaaggagcagcatgtggtcccccct
acgcaaaccgccgacatcaccgtcctcaactggagccccaacgggaactgcctggtatcg
ggggataggcttggtatcctgctcttatggaagttggaccaaaggggtcgagtacaaggg
gcaccgctgctgaaacacgagtatggaaaacacctcactcactgcatcttccggctcccc
cctcccggcgaggacctcgttcagttggcgaaggcagctgtgagtggtgatgagaaagcc
ctggacaagtttaactggaggaagtgtggctttggaagtttcctgaaaatgggacctcaa
gagggactctcattctttgtcagcttgaccgatgggaccgtgcactacgtggacgagaag
ggcaggacggcccgggtggcgtccacggacagctccattcagacgctgttctacctggag
gagagagaggtgctggtggcagtcaccgagagcctgctgctgtgtctgttcacggtgatg
cccgagggcacagccgaggaggtgatgaaggtaaagctgagtggaaatatgggtcgccag
gcaaacgtcgccctgatcaacagcagccttcttgtgaccgccactggggaggcggtcctc
agattctgggatttagaacgaggagagaattacgtactgagtccagaggagaagtttggt
tttgaaaaaggagagaatatgaactgtgtttcttactgtagagtcaaaggtcttctggca
gcaggtaccgataaagggcgtgtagccatgtggagaaaagtgccaggcccccagagcagc
caaggggtggagggcaaagacaggtggacccttcagatccccactgagcttgaaggaaac
atcacacagataaagtggggctccaggaagagcctcctggcagtgaacagcatcagctcc
gtgctcatcctccgcgagcaggccatgtcgtcccacttccaccagcaggtggccgcggtg
caggtctccccgagcctactcagcgtgtccttcctgtccacgggggtgacgcacagcctg
cgcacagacatgtacatcagcggagtgttcgccaccaaggatgctgttgccgtctggaat
ggaaaacaggtggtgatctttgagccttctggagccacattacgaagtgcaggtaccttc
ctgtgtgagtctccagtgttagccatgcacgaagaaaacgtttatacggtggagccaaac
cgagtccaagttcgaacctggcaggggactgtgaaacaactcctgccattttccgaaaca
gaggggaacccatgcttctttgacatctgtggaaatttcctggttgtagggacagacttg
gctcactttaaaagctttgatctatcccgaagagaggcgaaggtgcactgcagctgcaag
agcctggcagggctggtcccgggcgttgggggcatggcctccctcaggtgcaatgccagc
ggcagcaagatcagcatcctcctcagcaaggctgacaacagccccgattccagaatctgc
ttctacgatgtggaaatggacacagtgaccatcctcgacttcaagaggggacagatagat
cagagagagacgttgtcctttaatggacaggagactaagaaaagccaggcccttgcagat
gagaggctgacgaatctcgtgcctgtgagccacttctgggatcagagtgagcccaggctg
tttgtgtgtgaagccttgcaggaagtgccgggcgccccgctgcagccaacggacaggaag
gccctgggcgaggccagcacaggccccacggcagacgtgctggtcctgtctttcttcgtc
tctgaagagcacggcttcctgttgcaggacagcttcctccggcctcccgtcttccaggcg
ctcctgggaatccaagtgccccattattacttcatgagaaagccgggagaagtggacctc
gaggaccaggtggactccgggtcccagcgcatcccccagacggtgggcaggaggcccctg
cgggacttcgtggggctagaagactgtgacaagcccacgcaggacgccatgctcaacttc
accttcttcctggctgtcggggacatggacgaagccttccggtccatcaagctcatcaaa
agcgaggctgtctgggagaacatggcgcgcatgtgcgtgaagactcagcggctggatgtt
gccaaggtgtgcctgggacacatgggccacgcgcgcggagcccgagcgctgcgggaggct
gagcaggagccagagccagaggccagggtggccgtgttggccatacagctgggcatgctg
gaggatgcggagcatctgtacaagaaatgcgggcgctacgacctcctcaataggctcctg
caggcagagggccagtggcagagggccattgaggtggctgagcgacacgaccgcgtgcac
ctgcgcaccacctactacaattacgcccggcacctggaggccagcggggactgcagcctg
gccctcagctactacgagaaatcagacacgcaccgcttcgaggtgccacggatgctggcg
gaggacctgcaggccctggagctatacatcaacaagatgaaggacaagaccctgtggagg
tggtgggcccagtacctggagagccaggccgagatggatgctgcacttcgctactatgag
ctggcgcacgactacttctctctggtccgcgtttactgcttccagggcaatatccagaag
gccgcagagatagccagcgagaccgggaactgggcggcctcctaccacctggcccgccag
tacgagagccaggacgaggtgcggcaggccgtgcacttctacacacgcgcccaggccttc
aacaatgccatccgcctctgtaaggagcacggcctggatgaccagcttatgaatttggcc
ctgctgagctcccccaaggacatgatcgaggccgcacgctactacgaggagaagggcgag
cagatggaccaggcggtcatgctgtaccacaaggccggccacttctccaaggccctggag
ctggccttcgccacacagcagtttgtggccctgcagcttgtggcagaggacctggacgag
aagtcagaccccgccctcctggcccgctgctccgatttcttcctggagcacagtcagtac
gagaaggcggtggagctgctgctagccgccaagaagtatcacgaagccctgcagctctgc
ctggagcataacttgaccatcactgaggagatggctgaaaagatgacggtgtccaaggac
tgcaaggagctgtctgaagagtcccggcgtgagctgctggagcagattgccagctgctgc
atgcgccagggcaactaccacctggccaccaagaagtacacgcaggcaggggacaggctg
aaggccatgagagcactgctcaagtctggggacactgagaaaattgtgttctttgcgggc
gtctcgaggcaaaaggagatttacatcatggcagccaactacctgcagtccctggactgg
cggaaggacccggagatcatgaagagcatcatcagcttctacaccaagggccgggccctg
gacctcctggccggcttctatgatgcctgtgcccaggtagagatcgacgagtaccagaac
tacgacaaggcccacggggcactgactgaggcctacaagtgcctgtccaaggccaaggcc
aggagcccactggaccaggaggccaggctggcgcagctgcagagcaaaatggcactggtg
aagcgcttcatgcaggcccgcaggacatacaccgaggaccccaaggagtcggtcaggcag
tgcaagctgctcctggaggagccggacctggacagcaccgtccgcgtcggggacgtatac
ggcttcctggttgagcgccacgtgcagatggaggacctgcagacggcctacaagtacctg
gaggagatgcggaagagagtgccctccgccaacgtgtcgtactacgtgagccagcgcact
gtggacgccgtgcaccagggcctgggcatccctctgatgtgcaccatgccggagcagatg
cgccacaacaacatggaggatcacaaggagatggacgaggaggtgatggaggaggtggag
aatggcccctga
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integrated database retrieval system
